RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ATP1A1P05023 1023 aaKnown RBP9.86□□□□□ -0.83
RTN4-206ENST00000394611 SEC24CP53992 1094 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 EN1Q05925 392 aaPredicted RBP9.86□□□□□ -0.83
RTN4-206ENST00000394611 IQCEQ6IPM2 695 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 DEFB132Q7Z7B7 95 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 FAM71BQ8TC56 605 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 WWC3Q9ULE0 1092 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 EPN1Q9Y6I3 576 aaPredicted RBP9.86□□□□□ -0.83
RTN4-206ENST00000394611 CCDC194A0A1B0GVG4 234 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 KRT14P02533 472 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 CYLC1P35663 651 aaPredicted RBP9.86□□□□□ -0.83
RTN4-206ENST00000394611 ERFP50548 548 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 APBA1Q02410 837 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 SCARF1Q14162 830 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 MSL1Q68DK7 614 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 CYP26C1Q6V0L0 522 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 TMC4Q7Z404 712 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 TCP11Q8WWU5 503 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 CABS1Q96KC9 395 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 MMS19Q96T76 1030 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 CCNL1Q9UK58 526 aaPredicted RBP9.86□□□□□ -0.83
RTN4-206ENST00000394611 MAP2K1Q02750 393 aaPredicted RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 PTPN12Q05209 780 aaKnown RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 TRIM68Q6AZZ1 485 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 PROM2Q8N271 834 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 TC2NQ8N9U0 490 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 THOC1Q96FV9 657 aaKnown RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 L2HGDHQ9H9P8 463 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 LRRC4BQ9NT99 713 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 ADGRG1Q9Y653 693 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 DUSP10Q9Y6W6 482 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 ZNF532Q9HCE3 1301 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 TMEM110-MUSTN1A8MSY1 372 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 KCNJ18B7U540 433 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 VAV2P52735 878 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 KCNJ12Q14500 433 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 EZH2Q15910 746 aaKnown RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 CCDC40Q4G0X9 1142 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 TRIM65Q6PJ69 517 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 KIF6Q6ZMV9 814 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 HEATR3Q7Z4Q2 680 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 RPAINQ86UA6 219 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 NOSTRINQ8IVI9 506 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 CSGALNACT2Q8N6G5 542 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 ENGASEQ8NFI3 743 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 CTCFLQ8NI51 663 aaPredicted RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 TACC1O75410 805 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 MOCS3O95396 460 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 SMIM5Q71RC9 77 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 MLKLQ8NB16 471 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 RRP36Q96EU6 259 aaKnown RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 SELENOOQ9BVL4 669 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 DPH5Q9H2P9 285 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 FTCDO95954 541 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 VIMP08670 466 aaKnown RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 FAM47AQ5JRC9 791 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 LRRC31Q6UY01 552 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 WASF1Q92558 559 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 GPKOWQ92917 476 aaPredicted RBP eCLIP9.85□□□□□ -0.83
RTN4-206ENST00000394611 ALS2CR12Q96Q35 445 aa9.85□□□□□ -0.83
RTN4-206ENST00000394611 NOC4LQ9BVI4 516 aaKnown RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 TTF2Q9UNY4 1162 aaKnown RBP9.85□□□□□ -0.83
RTN4-206ENST00000394611 MAP3K9P80192 1104 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 PAK1Q13153 545 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 APOA5Q6Q788 366 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 RRAGAQ7L523 313 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 HPS3Q969F9 1004 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 MLXIPQ9HAP2 919 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 LRWD1Q9UFC0 647 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 MKRN1Q9UHC7 482 aaKnown RBP9.84□□□□□ -0.83
RTN4-206ENST00000394611 GCKP35557 465 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 CKAP4Q07065 602 aaKnown RBP9.84□□□□□ -0.83
RTN4-206ENST00000394611 PPP1R7Q15435 360 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 IFIT1BQ5T764 474 aaKnown RBP9.84□□□□□ -0.83
RTN4-206ENST00000394611 HAUS7Q99871 368 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 EFCC1Q9HA90 598 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 RIPOR2Q9Y4F9 1068 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 CD2APQ9Y5K6 639 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 TSPY2A6NKD2 308 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 NEFHP12036 1026 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 EZRP15311 586 aaKnown RBP9.84□□□□□ -0.83
RTN4-206ENST00000394611 CYP7A1P22680 504 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 IL15P40933 162 aaPredicted RBP9.84□□□□□ -0.83
RTN4-206ENST00000394611 SF3B2Q13435 895 aaKnown RBP9.84□□□□□ -0.83
RTN4-206ENST00000394611 MORC3Q14149 939 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 TXNRD1Q16881 649 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 DNAAF5Q86Y56 855 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 METTL22Q9BUU2 404 aaPredicted RBP9.84□□□□□ -0.83
RTN4-206ENST00000394611 POLR3EQ9NVU0 708 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 NFU1Q9UMS0 254 aa9.84□□□□□ -0.83
RTN4-206ENST00000394611 PP2D1A8MPX8 630 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 EYA2O00167 538 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 PPFIA4O75335 1185 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 MAP3K12Q12852 859 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 RAPGEF1Q13905 1077 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 NCAPHQ15003 741 aa9.83□□□□□ -0.84
RTN4-206ENST00000394611 TTF1Q15361 905 aaPredicted RBP9.83□□□□□ -0.84
RTN4-206ENST00000394611 CYB5R4Q7L1T6 521 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms