RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 E2F5Q15329 346 aa14.63□□□□□ -0.07
USP49-203ENST00000394253 ICA1LQ8NDH6 482 aa14.63□□□□□ -0.07
USP49-203ENST00000394253 VPS16Q9H269 839 aa14.63□□□□□ -0.07
USP49-203ENST00000394253 NFKBIL1Q9UBC1 381 aaPredicted RBP14.63□□□□□ -0.07
USP49-203ENST00000394253 RFX1P22670 979 aa14.63□□□□□ -0.07
USP49-203ENST00000394253 FANCCQ00597 558 aa14.63□□□□□ -0.07
USP49-203ENST00000394253 NSD3Q9BZ95 1437 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 NBPF20Q3BBV1 942 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.62□□□□□ -0.07
USP49-203ENST00000394253 ZNF711Q9Y462 761 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 S100A5P33763 92 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 MCTP2Q6DN12 878 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 PRDM1O75626 825 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 TRIM33Q9UPN9 1127 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 POLR2BP30876 1174 aaKnown RBP14.62□□□□□ -0.07
USP49-203ENST00000394253 HADHQ16836 314 aaKnown RBP14.62□□□□□ -0.07
USP49-203ENST00000394253 TLK2Q86UE8 772 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 DCLK2Q8N568 766 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 PHF21AQ96BD5 680 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 SMYD2Q9NRG4 433 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 TNNI2P48788 182 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 AP2B1P63010 937 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 MED21Q13503 144 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 NLRP9Q7RTR0 991 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 KCNH5Q8NCM2 988 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 RABGGTAQ92696 567 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 PRDM11Q9NQV5 511 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 TBC1D23Q9NUY8 699 aa14.62□□□□□ -0.07
USP49-203ENST00000394253 MYH7P12883 1935 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 POLR2DO15514 142 aaKnown RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 TCP1P17987 556 aaKnown RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 CEP78Q5JTW2 689 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 MMS22LQ6ZRQ5 1243 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 DNAJC17Q9NVM6 304 aaKnown RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 IRAK4Q9NWZ3 460 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 PDE4DQ08499 809 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 CATSPER1Q8NEC5 780 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 LLPHQ9BRT6 129 aaKnown RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 C6orf229H3BNL8 230 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 KCNK3O14649 394 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 HOXA7P31268 230 aaPredicted RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 BCL2L12Q9HB09 334 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 MPP6Q9NZW5 540 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 BZW2Q9Y6E2 419 aaKnown RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 CHEK2O96017 543 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 ALS2CLQ60I27 953 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 PPP1R42Q7Z4L9 355 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 CDK19Q9BWU1 502 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 MRPL44Q9H9J2 332 aaKnown RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 KCNH3Q9ULD8 1083 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 ORC4O43929 436 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 TADA3O75528 432 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 XRCC5P13010 732 aaKnown RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 ATF7P17544 494 aaPredicted RBP14.61□□□□□ -0.07
USP49-203ENST00000394253 STAT1P42224 750 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 C2CD5Q86YS7 1000 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 SNX29Q8TEQ0 813 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 DYDC2Q96IM9 177 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 PDE11AQ9HCR9 933 aa14.61□□□□□ -0.07
USP49-203ENST00000394253 RASSF10A6NK89 507 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 CAPN9O14815 690 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 WDR47O94967 919 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 SLC9A1P19634 815 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 GUCY1A3Q02108 690 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■■■■■ 54.9
USP49-203ENST00000394253 STOML1Q9UBI4 398 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 LZTS3O60299 673 aaPredicted RBP14.6□□□□□ -0.07
USP49-203ENST00000394253 RHOBTB1O94844 696 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 TUBGCP3Q96CW5 907 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 PRAM1Q96QH2 718 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 MAGEA1P43355 309 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 DEFA1P59665 94 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 DEFA3P59666 94 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 TEX11Q8IYF3 940 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 OTUB1Q96FW1 271 aaPredicted RBP14.6□□□□□ -0.07
USP49-203ENST00000394253 TYW5A2RUC4 315 aaKnown RBP14.6□□□□□ -0.07
USP49-203ENST00000394253 ICE2Q659A1 982 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 SPDYE1Q8NFV5 336 aaPredicted RBP14.6□□□□□ -0.07
USP49-203ENST00000394253 ATG3Q9NT62 314 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 SEPT3Q9UH03 358 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 TOP2AP11388 1531 aaKnown RBP14.6□□□□□ -0.07
USP49-203ENST00000394253 SCG2P13521 617 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 MAGEA9P43362 315 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 HORMAD1Q86X24 394 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 EXOC4Q96A65 974 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 CTNND1O60716 968 aaKnown RBP14.6□□□□□ -0.07
USP49-203ENST00000394253 LDHAL6AQ6ZMR3 332 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 TEX13AQ9BXU3 409 aaPredicted RBP14.6□□□□□ -0.07
USP49-203ENST00000394253 ANKRD2Q9GZV1 360 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 E2F6O75461 281 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 KRT7P08729 469 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 SLC4A4Q9Y6R1 1079 aa14.6□□□□□ -0.07
USP49-203ENST00000394253 N4BP1O75113 896 aaKnown RBP14.59□□□□□ -0.07
USP49-203ENST00000394253 GNL1P36915 607 aaPredicted RBP14.59□□□□□ -0.07
USP49-203ENST00000394253 RBM8AQ9Y5S9 174 aaKnown RBP14.59□□□□□ -0.07
USP49-203ENST00000394253 TRIM27P14373 513 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 ST5P78524 1137 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 PDE1BQ01064 536 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms