RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 IFT88Q13099 833 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 MCTP2Q6DN12 878 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 WTIPA6NIX2 430 aaPredicted RBP16.29■□□□□ 0.2
SFXN3-202ENST00000393459 MYO1BO43795 1136 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 PAK1Q13153 545 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 CXorf56Q9H5V9 222 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
SFXN3-202ENST00000393459 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
SFXN3-202ENST00000393459 H7C1W4 665 aa16.28■□□□□ 0.2
SFXN3-202ENST00000393459 ITGA6P23229 1130 aa16.28■□□□□ 0.2
SFXN3-202ENST00000393459 AMPD2Q01433 879 aa16.28■□□□□ 0.2
SFXN3-202ENST00000393459 IQUBQ8NA54 791 aa16.28■□□□□ 0.2
SFXN3-202ENST00000393459 NOC3LQ8WTT2 800 aaKnown RBP16.28■□□□□ 0.2
SFXN3-202ENST00000393459 CAPN6Q9Y6Q1 641 aa16.28■□□□□ 0.2
SFXN3-202ENST00000393459 RPSAP08865 295 aaKnown RBP16.28■□□□□ 0.2
SFXN3-202ENST00000393459 SCP2P22307 547 aa16.28■□□□□ 0.2
SFXN3-202ENST00000393459 LCORLQ8N3X6 602 aa16.28■□□□□ 0.2
SFXN3-202ENST00000393459 OR2W6PQ8NHA6 318 aa16.28■□□□□ 0.2
SFXN3-202ENST00000393459 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
SFXN3-202ENST00000393459 ADD2P35612 726 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 TCP11X2Q5H9J9 407 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 LRP10Q7Z4F1 713 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 MAATS1Q7Z4T9 603 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 GOLPH3Q9H4A6 298 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 XDHP47989 1333 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 PKD1L3Q7Z443 1732 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 SKAP2O75563 359 aaPredicted RBP16.27■□□□□ 0.2
SFXN3-202ENST00000393459 FMNL1O95466 1100 aaPredicted RBP16.27■□□□□ 0.2
SFXN3-202ENST00000393459 PARP1P09874 1014 aaKnown RBP16.27■□□□□ 0.2
SFXN3-202ENST00000393459 HLFQ16534 295 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 CCDC178Q5BJE1 867 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 MTRQ99707 1265 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 NFU1Q9UMS0 254 aa16.27■□□□□ 0.2
SFXN3-202ENST00000393459 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.19
SFXN3-202ENST00000393459 OR8K1Q8NGG5 319 aa16.27■□□□□ 0.19
SFXN3-202ENST00000393459 GPKOWQ92917 476 aaPredicted RBP eCLIP16.27■□□□□ 0.19
SFXN3-202ENST00000393459 SLC24A3Q9HC58 644 aa16.27■□□□□ 0.19
SFXN3-202ENST00000393459 MYH10P35580 1976 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 FAM153BP0C7A2 387 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 FAM153CQ494X1 144 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 TRAPPC11Q7Z392 1133 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 KSR1Q8IVT5 923 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 CCDC155Q8N6L0 562 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 FANCBQ8NB91 859 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 CCDC43Q96MW1 224 aaKnown RBP16.26■□□□□ 0.19
SFXN3-202ENST00000393459 FAM153AQ9UHL3 310 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 MRC1P22897 1456 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 ERCC5P28715 1186 aaPredicted RBP16.26■□□□□ 0.19
SFXN3-202ENST00000393459 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
SFXN3-202ENST00000393459 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 CCNI2Q6ZMN8 369 aaPredicted RBP16.26■□□□□ 0.19
SFXN3-202ENST00000393459 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 CRACR2BQ8N4Y2 399 aaPredicted RBP16.26■□□□□ 0.19
SFXN3-202ENST00000393459 CTAGE1Q96RT6 745 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 LRP2BPQ9P2M1 347 aa16.26■□□□□ 0.19
SFXN3-202ENST00000393459 CDC25CP30307 473 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 TBC1D8BQ0IIM8 1120 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 MMRN2Q9H8L6 949 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 TTMPQ5BVD1 217 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 WDR59Q6PJI9 974 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 KLHL7Q8IXQ5 586 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 BANK1Q8NDB2 785 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 NAA15Q9BXJ9 866 aaKnown RBP16.25■□□□□ 0.19
SFXN3-202ENST00000393459 CPVLQ9H3G5 476 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 NHEJ1Q9H9Q4 299 aaPredicted RBP16.25■□□□□ 0.19
SFXN3-202ENST00000393459 PCDH11XQ9BZA7 1347 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 PCDH11YQ9BZA8 1340 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
SFXN3-202ENST00000393459 NLRP5P59047 1200 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 HLTFQ14527 1009 aaKnown RBP eCLIP16.25■□□□□ 0.19
SFXN3-202ENST00000393459 CDKAL1Q5VV42 579 aa16.25■□□□□ 0.19
SFXN3-202ENST00000393459 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
SFXN3-202ENST00000393459 E7EVH7 732 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 KRT86O43790 486 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 STAT6P42226 847 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 CCDC91Q7Z6B0 441 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 CCDC42Q96M95 316 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 STRBPQ96SI9 672 aaKnown RBP16.24■□□□□ 0.19
SFXN3-202ENST00000393459 NLRC4Q9NPP4 1024 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 AKR1B10O60218 316 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 PBX1P40424 430 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 CARSP49589 748 aaKnown RBP16.24■□□□□ 0.19
SFXN3-202ENST00000393459 BCAMP50895 628 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 GUCY2DQ02846 1103 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 KIF5AQ12840 1032 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 NNTQ13423 1086 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 TDRD12Q587J7 1177 aaKnown RBP16.24■□□□□ 0.19
SFXN3-202ENST00000393459 TTC38Q5R3I4 469 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 MARCH10Q8NA82 808 aaPredicted RBP16.24■□□□□ 0.19
SFXN3-202ENST00000393459 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
SFXN3-202ENST00000393459 RNPC3Q96LT9 517 aaKnown RBP16.24■□□□□ 0.19
SFXN3-202ENST00000393459 TANGO6Q9C0B7 1094 aa16.24■□□□□ 0.19
SFXN3-202ENST00000393459 ZNHIT6Q9NWK9 470 aaKnown RBP16.24■□□□□ 0.19
SFXN3-202ENST00000393459 MAGEC2Q9UBF1 373 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms