RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
MKS1-202ENST00000393119 ENTPD3O75355 529 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 CCDC192P0DO97 292 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 SNHG28P0DPA3 235 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 ZNF543Q08ER8 600 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 LONRF3Q496Y0 759 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 TBC1D10BQ4KMP7 808 aaPredicted RBP17.14■□□□□ 0.33
MKS1-202ENST00000393119 KIAA1755Q5JYT7 1200 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 C11orf57Q6ZUT1 292 aaPredicted RBP17.14■□□□□ 0.33
MKS1-202ENST00000393119 FOXP4Q8IVH2 680 aaPredicted RBP17.14■□□□□ 0.33
MKS1-202ENST00000393119 KRI1Q8N9T8 703 aaKnown RBP17.14■□□□□ 0.33
MKS1-202ENST00000393119 EPSTI1Q96J88 318 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 JMJD4Q9H9V9 463 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 MYOZ2Q9NPC6 264 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 PCDHA4Q9UN74 947 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 FZD1Q9UP38 647 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 TRIM75PA6NK02 468 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 NAPAP54920 295 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 ICA1Q05084 483 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 IL17AQ16552 155 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 INF2Q27J81 1249 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 SOGA3Q5TF21 947 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 GRAMD1CQ8IYS0 662 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 ACER1Q8TDN7 264 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 MYO3BQ8WXR4 1341 aa17.14■□□□□ 0.33
MKS1-202ENST00000393119 M0R2N6 131 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 CDC25AP30304 524 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 GMPSP49915 693 aaPredicted RBP17.13■□□□□ 0.33
MKS1-202ENST00000393119 PTGDRQ13258 359 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 TTC38Q5R3I4 469 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 PRAMEF18Q5VWM3 479 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 RRP36Q96EU6 259 aaKnown RBP17.13■□□□□ 0.33
MKS1-202ENST00000393119 PDLIM2Q96JY6 352 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 RIOX1Q9H6W3 641 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 BIN2Q9UBW5 565 aaPredicted RBP17.13■□□□□ 0.33
MKS1-202ENST00000393119 HPSEQ9Y251 543 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 ZNF541Q9H0D2 1346 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 A0A087X0B3 334 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 SMCO2A6NFE2 343 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 PTPREP23469 700 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 SYKP43405 635 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.13■□□□□ 0.33
MKS1-202ENST00000393119 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
MKS1-202ENST00000393119 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 TMOD2Q9NZR1 351 aa17.13■□□□□ 0.33
MKS1-202ENST00000393119 ZYXQ15942 572 aaKnown RBP17.12■□□□□ 0.33
MKS1-202ENST00000393119 JAKMIP3Q5VZ66 844 aa17.12■□□□□ 0.33
MKS1-202ENST00000393119 SASS6Q6UVJ0 657 aa17.12■□□□□ 0.33
MKS1-202ENST00000393119 FAM151AQ8WW52 585 aa17.12■□□□□ 0.33
MKS1-202ENST00000393119 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
MKS1-202ENST00000393119 ATRNL1Q5VV63 1379 aa17.12■□□□□ 0.33
MKS1-202ENST00000393119 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
MKS1-202ENST00000393119 PNOCQ13519 176 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 SLFN13Q68D06 897 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
MKS1-202ENST00000393119 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 CBX8Q9HC52 389 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 VWA3AA6NCI4 1184 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 CUTAO60888 179 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 NT5C2P49902 561 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 DGKZQ13574 1117 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 ZBED3Q96IU2 234 aaPredicted RBP17.11■□□□□ 0.33
MKS1-202ENST00000393119 UIMC1Q96RL1 719 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 SEC63Q9UGP8 760 aaKnown RBP17.11■□□□□ 0.33
MKS1-202ENST00000393119 KCNH3Q9ULD8 1083 aa17.11■□□□□ 0.33
MKS1-202ENST00000393119 F5H6K3 240 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
MKS1-202ENST00000393119 SLC1A4P43007 532 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 KLRC3Q07444 240 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 UBE2SQ16763 222 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
MKS1-202ENST00000393119 DLK2Q6UY11 383 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 TMEM60Q9H2L4 133 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.1■□□□□ 0.33
MKS1-202ENST00000393119 SRPRBQ9Y5M8 271 aaKnown RBP17.1■□□□□ 0.33
MKS1-202ENST00000393119 MYH8P13535 1937 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 POLR2DO15514 142 aaKnown RBP17.1■□□□□ 0.33
MKS1-202ENST00000393119 CASP1P29466 404 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 RASA3Q14644 834 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 JMYQ8N9B5 988 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 LZTS2Q9BRK4 669 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 PRDM4Q9UKN5 801 aa17.1■□□□□ 0.33
MKS1-202ENST00000393119 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
MKS1-202ENST00000393119 NDUFB10O96000 172 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 ARHGAP27Q6ZUM4 889 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 TMEM179Q6ZVK1 233 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 FHDC1Q9C0D6 1143 aaPredicted RBP17.09■□□□□ 0.33
MKS1-202ENST00000393119 ZMYND12Q9H0C1 365 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 CNOT7Q9UIV1 285 aaKnown RBP17.09■□□□□ 0.33
MKS1-202ENST00000393119 NOL7Q9UMY1 257 aaKnown RBP17.09■□□□□ 0.33
MKS1-202ENST00000393119 FER1L6Q2WGJ9 1857 aa17.09■□□□□ 0.33
MKS1-202ENST00000393119 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms