RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 NOM1Q5C9Z4 860 aaKnown RBP15.76■□□□□ 0.11
PTN-202ENST00000393083 CPLX2Q6PUV4 134 aaKnown RBP15.76■□□□□ 0.11
PTN-202ENST00000393083 CLEC17AQ6ZS10 378 aa15.76■□□□□ 0.11
PTN-202ENST00000393083 ZFYVE28Q9HCC9 887 aa15.76■□□□□ 0.11
PTN-202ENST00000393083 TCP11L1Q9NUJ3 509 aa15.76■□□□□ 0.11
PTN-202ENST00000393083 CLIP2Q9UDT6 1046 aa15.76■□□□□ 0.11
PTN-202ENST00000393083 ADGRA2Q96PE1 1338 aa15.76■□□□□ 0.11
PTN-202ENST00000393083 CDKL5O76039 1030 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 TTLL1O95922 423 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 F13A1P00488 732 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 CYP2C8P10632 490 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 VCAM1P19320 739 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 CDC27P30260 824 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 RTN1Q16799 776 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 NUP133Q8WUM0 1156 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 SH2D4AQ9H788 454 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 VCPKMTQ9H867 229 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 GPR25O00155 361 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 TLR2O60603 784 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 PPFIA3O75145 1194 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 CCDC178Q5BJE1 867 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 CATIPQ7Z7H3 387 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 LPAR1Q92633 364 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 PARK7Q99497 189 aaKnown RBP15.75■□□□□ 0.11
PTN-202ENST00000393083 ASCC2Q9H1I8 757 aaPredicted RBP15.75■□□□□ 0.11
PTN-202ENST00000393083 SYNPO2Q9UMS6 1093 aa15.75■□□□□ 0.11
PTN-202ENST00000393083 DDAH1O94760 285 aa15.74■□□□□ 0.11
PTN-202ENST00000393083 ADD1P35611 737 aaKnown RBP15.74■□□□□ 0.11
PTN-202ENST00000393083 FOSBP53539 338 aa15.74■□□□□ 0.11
PTN-202ENST00000393083 PABPC4Q13310 644 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTN-202ENST00000393083 FAM217BQ9NTX9 383 aaPredicted RBP15.74■□□□□ 0.11
PTN-202ENST00000393083 ORC3Q9UBD5 711 aaPredicted RBP15.74■□□□□ 0.11
PTN-202ENST00000393083 USP17L15C9J2P7 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 USP17L13C9JLJ4 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 USP17L11C9JVI0 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 USP17L18D6R9N7 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 USP17L22D6RA61 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 USP17L17D6RBQ6 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 USP17L19D6RCP7 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 USP17L20D6RJB6 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 GOLGA6L22H0YM25 854 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 H3BQV1 296 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 CALM1P0DP23 149 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 CALM2P0DP24 149 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 CALM3P0DP25 149 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 OSBPP22059 807 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 USP17L24Q0WX57 530 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 PPP4R3BQ5MIZ7 849 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 IFFO2Q5TF58 517 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 RCSD1Q6JBY9 416 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 C17orf99Q6UX52 265 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 CATSPERGQ6ZRH7 1159 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 SPICE1Q8N0Z3 855 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 RPAP3Q9H6T3 665 aaPredicted RBP15.73■□□□□ 0.11
PTN-202ENST00000393083 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 PRDM10Q9NQV6 1147 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 PNMA3Q9UL41 463 aa15.73■□□□□ 0.11
PTN-202ENST00000393083 CCDC196A0A1B0GTZ2 297 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 F5H6K3 240 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 FDPSP14324 419 aaKnown RBP15.72■□□□□ 0.11
PTN-202ENST00000393083 KLRC3Q07444 240 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 MCTP1Q6DN14 999 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 POTEEQ6S8J3 1075 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 DGKHQ86XP1 1220 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 LRRC47Q8N1G4 583 aaKnown RBP15.72■□□□□ 0.11
PTN-202ENST00000393083 GMCL1P1Q8NEA9 526 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 ZNF296Q8WUU4 475 aaPredicted RBP15.72■□□□□ 0.11
PTN-202ENST00000393083 P2RX7Q99572 595 aaKnown RBP15.72■□□□□ 0.11
PTN-202ENST00000393083 KAT14Q9H8E8 782 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 STX8Q9UNK0 236 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 STK36Q9NRP7 1315 aa15.72■□□□□ 0.11
PTN-202ENST00000393083 WDR46O15213 610 aaKnown RBP15.71■□□□□ 0.11
PTN-202ENST00000393083 NDUFB10O96000 172 aa15.71■□□□□ 0.11
PTN-202ENST00000393083 BCRP11274 1271 aa15.71■□□□□ 0.11
PTN-202ENST00000393083 IRX3P78415 501 aaPredicted RBP15.71■□□□□ 0.11
PTN-202ENST00000393083 NTRK3Q16288 839 aa15.71■□□□□ 0.11
PTN-202ENST00000393083 FOXD4L6Q3SYB3 417 aaPredicted RBP15.71■□□□□ 0.11
PTN-202ENST00000393083 FOXD4L3Q6VB84 417 aaPredicted RBP15.71■□□□□ 0.11
PTN-202ENST00000393083 FANCBQ8NB91 859 aa15.71■□□□□ 0.11
PTN-202ENST00000393083 ANKS1AQ92625 1134 aa15.71■□□□□ 0.11
PTN-202ENST00000393083 CHAMP1Q96JM3 812 aa15.71■□□□□ 0.11
PTN-202ENST00000393083 CPA4Q9UI42 421 aa15.71■□□□□ 0.11
PTN-202ENST00000393083 ATP6V1DQ9Y5K8 247 aa15.71■□□□□ 0.11
PTN-202ENST00000393083 IFNAR1P17181 557 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 PTMSP20962 102 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 PPP2R5BQ15173 497 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 SMCR8Q8TEV9 937 aaPredicted RBP15.7■□□□□ 0.1
PTN-202ENST00000393083 PHKBQ93100 1093 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 TMEM47Q9BQJ4 181 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 RBM28Q9NW13 759 aaKnown RBP15.7■□□□□ 0.1
PTN-202ENST00000393083 FKTNO75072 461 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 FMNL1O95466 1100 aaPredicted RBP15.7■□□□□ 0.1
PTN-202ENST00000393083 TOP1P11387 765 aaKnown RBP15.7■□□□□ 0.1
PTN-202ENST00000393083 HERVK_113P62684 666 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 SP3Q02447 781 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 SSRP1Q08945 709 aaKnown RBP15.7■□□□□ 0.1
PTN-202ENST00000393083 TROAPQ12815 778 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 FERMT3Q86UX7 667 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 PNMA1Q8ND90 353 aa15.7■□□□□ 0.1
PTN-202ENST00000393083 CTCFLQ8NI51 663 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms