RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 A0A1W2PQY0 241 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 MEIS3P2A8K0S8 358 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 WASH4PA8MWX3 477 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 USP2O75604 605 aaPredicted RBP2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 SASH1O94885 1247 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 UBOX5O94941 541 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 NME1P15531 152 aaKnown RBP2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 PNLIPP16233 465 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 GARTP22102 1010 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 BMP8BP34820 402 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 LINC00310P59036 64 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 DLG4P78352 724 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 SRSF3P84103 164 aaKnown RBP2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 AUHQ13825 339 aaKnown RBP2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 HLA-DQA1Q5Y7H0 255 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 INTS3Q68E01 1043 aaKnown RBP2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 CYP2R1Q6VVX0 501 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 CABP7Q86V35 215 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 AMIGO3Q86WK7 504 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 SLITRK4Q8IW52 837 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 SIRT2Q8IXJ6 389 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 CCDC144CPQ8IYA2 1237 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 NLGN1Q8N2Q7 840 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 USHBP1Q8N6Y0 703 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 LINC01599Q8WXQ3 324 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 SIGLEC10Q96LC7 697 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 SLC6A18Q96N87 628 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 TM9SF2Q99805 663 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 KRTAP9-9Q9BYP9 154 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 KRTAP9-4Q9BYQ2 154 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 IRF2BPLQ9H1B7 796 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 ZCCHC4Q9H5U6 513 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 COPRSQ9NQ92 184 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 GFOD1Q9NXC2 390 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 ADAMTS1Q9UHI8 967 aa2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 DBR1Q9UK59 544 aaKnown RBP2.25□□□□□ -2.05
SNORD28B-201ENST00000390993 SHISA3A0PJX4 238 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 MEIS1O00470 390 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 TNFRSF10CO14798 259 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 SCAMP3O14828 347 aaKnown RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 PSPNO60542 156 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 TBC1D8O95759 1140 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 GSTM1P09488 218 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 NAT2P11245 290 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 ITGA4P13612 1032 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 PFKLP17858 780 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 POLR2BP30876 1174 aaKnown RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 PMS1P54277 932 aaKnown RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 CYP4F8P98187 520 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 POU4F1Q01851 419 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 TAGLNQ01995 201 aaKnown RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 CLCQ05315 142 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 MRPL58Q14197 206 aaKnown RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 NR1I3Q14994 352 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 TARBP2Q15633 366 aaKnown RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 LILRA6Q6PI73 481 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 SPOCD1Q6ZMY3 1216 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 TMC3Q7Z5M5 1100 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 NLRX1Q86UT6 975 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 C7orf61Q8IZ16 206 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 ZNF654Q8IZM8 581 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 TAB3Q8N5C8 712 aaPredicted RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 NUP43Q8NFH3 380 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 OR6P1Q8NGX9 317 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 VWCEQ96DN2 955 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 HHIPL1Q96JK4 782 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 ZNF512BQ96KM6 892 aaPredicted RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 MCOLN1Q9GZU1 580 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 PRDM14Q9GZV8 571 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 GBP3Q9H0R5 595 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 ANTXR1Q9H6X2 564 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 SUCOQ9UBS9 1254 aaKnown RBP2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 KCTD3Q9Y597 815 aa2.24□□□□□ -2.05
SNORD28B-201ENST00000390993 TRBV23OR9-2A0A075B6M9 112 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 KRTAP4-8A0A0G2JLE6 195 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 N4BP3O15049 544 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 DNAJA2O60884 412 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 PPM1BO75688 479 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 ZNF205O95201 554 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 VAV1P15498 845 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 ZNF16P17020 682 aaPredicted RBP2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 PRKCAP17252 672 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 CRKP46108 304 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 AFF3P51826 1226 aaKnown RBP2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 CTSWP56202 376 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 EIF6P56537 245 aaKnown RBP2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 ERVFRD-1P60508 538 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 RAB3GAP1Q15042 981 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 ZC3H14Q6PJT7 736 aaKnown RBP2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 ADAT2Q7Z6V5 191 aaKnown RBP2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 SP8Q8IXZ3 490 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 CRACR2BQ8N4Y2 399 aaPredicted RBP2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 CPLX3Q8WVH0 158 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 NUDT5Q9UKK9 219 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 ZNRF3Q9ULT6 936 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 FAN1Q9Y2M0 1017 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 GPR55Q9Y2T6 319 aaPredicted RBP2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 ZNF281Q9Y2X9 895 aa2.23□□□□□ -2.05
SNORD28B-201ENST00000390993 A0A087WZG4 1122 aa2.22□□□□□ -2.05
SNORD28B-201ENST00000390993 TMEM82A0PJX8 343 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms