RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 TLR7Q9NYK1 1049 aaKnown RBP7.85□□□□□ -1.15
TRAV35-201ENST00000390462 PGAP2Q9UHJ9 254 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 CORINQ9Y5Q5 1042 aa7.85□□□□□ -1.15
TRAV35-201ENST00000390462 CFTRP13569 1480 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 IFT140Q96RY7 1462 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.84□□□□□ -1.15
TRAV35-201ENST00000390462 F5H423 210 aaPredicted RBP7.84□□□□□ -1.15
TRAV35-201ENST00000390462 FZD9O00144 591 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 GFRA2O00451 464 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 ITGAVP06756 1048 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 MSX1P28360 303 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 CDK8P49336 464 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 GTF2A2P52657 109 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 KCNQ4P56696 695 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 RBM10P98175 930 aaKnown RBP7.84□□□□□ -1.15
TRAV35-201ENST00000390462 POU4F2Q12837 409 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 PCBP2Q15366 365 aaKnown RBP eCLIP7.84□□□□□ -1.15
TRAV35-201ENST00000390462 BBS9Q3SYG4 887 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 JAKMIP3Q5VZ66 844 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 SKAP1Q86WV1 359 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 NKAPQ8N5F7 415 aaKnown RBP7.84□□□□□ -1.15
TRAV35-201ENST00000390462 CXorf38Q8TB03 319 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 NAA15Q9BXJ9 866 aaKnown RBP7.84□□□□□ -1.15
TRAV35-201ENST00000390462 CSRNP2Q9H175 543 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 SLC12A5Q9H2X9 1139 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 AAASQ9NRG9 546 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 RABGAP1Q9Y3P9 1069 aa7.84□□□□□ -1.15
TRAV35-201ENST00000390462 B3GALT4O96024 378 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 CAPNS1P04632 268 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 HOXD8P13378 290 aaPredicted RBP7.83□□□□□ -1.16
TRAV35-201ENST00000390462 VCAM1P19320 739 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 GRIA2P42262 883 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 ECE1P42892 770 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 CCT5P48643 541 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 ERVK-21P61565 698 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 PRR20EP86478 221 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 PRR20CP86479 221 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 PRR20DP86480 221 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 PRR20BP86481 221 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 PRR20AP86496 221 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 FAPQ12884 760 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 DDX10Q13206 875 aaKnown RBP7.83□□□□□ -1.16
TRAV35-201ENST00000390462 SKOR2Q2VWA4 1001 aaPredicted RBP7.83□□□□□ -1.16
TRAV35-201ENST00000390462 CCDC184Q52MB2 194 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 ANKLE2Q86XL3 938 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 LRRN4CLQ8ND94 238 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 ACRBPQ8NEB7 543 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 KIFC2Q96AC6 838 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 ERP27Q96DN0 273 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 HSPBAP1Q96EW2 488 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 TSEN34Q9BSV6 310 aaKnown RBP7.83□□□□□ -1.16
TRAV35-201ENST00000390462 C1orf112Q9NSG2 853 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 CLIC5Q9NZA1 410 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 SUSD2Q9UGT4 822 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 ASAP1Q9ULH1 1129 aa7.83□□□□□ -1.16
TRAV35-201ENST00000390462 PRSS47A8MTI9 375 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 B4E1Z4 1266 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 SPINT1O43278 529 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 DNAJA2O60884 412 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 MAP3K6O95382 1288 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 IREB2P48200 963 aaKnown RBP7.82□□□□□ -1.16
TRAV35-201ENST00000390462 PLAURQ03405 335 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 PCDH1Q08174 1060 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 KLF1Q13351 362 aaPredicted RBP7.82□□□□□ -1.16
TRAV35-201ENST00000390462 SART3Q15020 963 aaKnown RBP7.82□□□□□ -1.16
TRAV35-201ENST00000390462 ELF2Q15723 593 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 WDR44Q5JSH3 913 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 PPP4R3AQ6IN85 833 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 MZT2AQ6P582 158 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 ADAMTSL4Q6UY14 1074 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 PNMA8AQ86V59 439 aaPredicted RBP7.82□□□□□ -1.16
TRAV35-201ENST00000390462 ZNF227Q86WZ6 799 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 KIF18BQ86Y91 864 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 POF1BQ8WVV4 589 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 HPS1Q92902 700 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 PPP1R14AQ96A00 147 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 WNK4Q96J92 1243 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 MAGEB10Q96LZ2 347 aaPredicted RBP7.82□□□□□ -1.16
TRAV35-201ENST00000390462 INSM2Q96T92 566 aaPredicted RBP7.82□□□□□ -1.16
TRAV35-201ENST00000390462 NUP88Q99567 741 aaPredicted RBP7.82□□□□□ -1.16
TRAV35-201ENST00000390462 ORAI3Q9BRQ5 295 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 EVLQ9UI08 416 aaPredicted RBP7.82□□□□□ -1.16
TRAV35-201ENST00000390462 PDZRN3Q9UPQ7 1066 aa7.82□□□□□ -1.16
TRAV35-201ENST00000390462 A0A1B0GTH6 734 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 TCRBV16S1A1N1A0A5B0 115 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 VDRP11473 427 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 SELPP16109 830 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 PLCG1P19174 1290 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 ALDH5A1P51649 535 aaPredicted RBP7.81□□□□□ -1.16
TRAV35-201ENST00000390462 IL2P60568 153 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 ZNF423Q2M1K9 1284 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 DACT2Q5SW24 774 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 SAMD5Q5TGI4 173 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 PIK3R6Q5UE93 754 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 HEATR6Q6AI08 1181 aaKnown RBP7.81□□□□□ -1.16
TRAV35-201ENST00000390462 RINLQ6ZS11 566 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 TRIM67Q6ZTA4 783 aa7.81□□□□□ -1.16
TRAV35-201ENST00000390462 CHST15Q7LFX5 561 aaPredicted RBP7.81□□□□□ -1.16
TRAV35-201ENST00000390462 CMTR2Q8IYT2 770 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms