RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 RNF217Q8TC41 542 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 PPM1EQ8WY54 764 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 BSNDQ8WZ55 320 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 DDX1Q92499 740 aaKnown RBP7.46□□□□□ -1.22
TRAV25-201ENST00000390454 EXOC2Q96KP1 924 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 CAMKK2Q96RR4 588 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 ARPC5LQ9BPX5 153 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 MUC3BQ9H195 1237 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 SPEF1Q9Y4P9 236 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 MED14O60244 1454 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 ATP7AQ04656 1500 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 EFCAB6Q5THR3 1501 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 INO80Q9ULG1 1556 aaPredicted RBP7.46□□□□□ -1.22
TRAV25-201ENST00000390454 KIF24Q5T7B8 1368 aa7.46□□□□□ -1.22
TRAV25-201ENST00000390454 ZC3H13Q5T200 1668 aaKnown RBP7.45□□□□□ -1.22
TRAV25-201ENST00000390454 TTC24A2A3L6 582 aaPredicted RBP7.45□□□□□ -1.22
TRAV25-201ENST00000390454 NPTXRO95502 500 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 B3GALT4O96024 378 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 RHOQP17081 205 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 NRLP54845 237 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 SFSWAPQ12872 951 aaKnown RBP7.45□□□□□ -1.22
TRAV25-201ENST00000390454 GNPTABQ3T906 1256 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 FAM209AQ5JX71 171 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 FAM102BQ5T8I3 360 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 DHX32Q7L7V1 743 aaKnown RBP7.45□□□□□ -1.22
TRAV25-201ENST00000390454 STRA8Q7Z7C7 330 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 TEX2Q8IWB9 1127 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 GRIN3AQ8TCU5 1115 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 FBXO41Q8TF61 875 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 SSH1Q8WYL5 1049 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 HOOK2Q96ED9 719 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 CLUHP3Q96NS8 147 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 PBX4Q9BYU1 374 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 PUS7LQ9H0K6 701 aaKnown RBP7.45□□□□□ -1.22
TRAV25-201ENST00000390454 SLC12A5Q9H2X9 1139 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 ZNF180Q9UJW8 692 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 NOB1Q9ULX3 412 aaKnown RBP7.45□□□□□ -1.22
TRAV25-201ENST00000390454 TNNQ9UQP3 1299 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 ADGRB3O60242 1522 aa7.45□□□□□ -1.22
TRAV25-201ENST00000390454 QRICH2Q9H0J4 1663 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 PPIP5K1Q6PFW1 1433 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 FAM177BA6PVY3 158 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 ZNF500O60304 480 aaPredicted RBP7.44□□□□□ -1.22
TRAV25-201ENST00000390454 GHRHP01286 108 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 F11P03951 625 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 FAM157BP0CG42 384 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 NME1P15531 152 aaKnown RBP7.44□□□□□ -1.22
TRAV25-201ENST00000390454 NEK4P51957 841 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 ZNF143P52747 638 aaPredicted RBP7.44□□□□□ -1.22
TRAV25-201ENST00000390454 FOXC1Q12948 553 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 FOXB2Q5VYV0 432 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 NLRC3Q7RTR2 1065 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 SPATS2Q86XZ4 545 aaKnown RBP7.44□□□□□ -1.22
TRAV25-201ENST00000390454 TMEM57Q8N5G2 664 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 SLC39A13Q96H72 371 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 PLEKHF1Q96S99 279 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 YIPF4Q9BSR8 244 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 AARSD1Q9BTE6 412 aaKnown RBP7.44□□□□□ -1.22
TRAV25-201ENST00000390454 AVENQ9NQS1 362 aaPredicted RBP7.44□□□□□ -1.22
TRAV25-201ENST00000390454 LRP2BPQ9P2M1 347 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 PCDHB10Q9UN67 800 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 DDX49Q9Y6V7 483 aaKnown RBP7.44□□□□□ -1.22
TRAV25-201ENST00000390454 CFAP74Q9C0B2 1584 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 PRR36Q9H6K5 1346 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 LTBP3Q9NS15 1303 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 PIK3R4Q99570 1358 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 YEATS2Q9ULM3 1422 aa7.44□□□□□ -1.22
TRAV25-201ENST00000390454 ZCCHC11Q5TAX3 1644 aaKnown RBP7.43□□□□□ -1.22
TRAV25-201ENST00000390454 NPHP1O15259 732 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
TRAV25-201ENST00000390454 GPR39O43194 453 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 SMNDC1O75940 238 aaKnown RBP eCLIP7.43□□□□□ -1.22
TRAV25-201ENST00000390454 IFIT2P09913 472 aaKnown RBP7.43□□□□□ -1.22
TRAV25-201ENST00000390454 BMP2P12643 396 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 SDSP20132 328 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 SUMO1P63165 101 aaKnown RBP7.43□□□□□ -1.22
TRAV25-201ENST00000390454 LAMC2Q13753 1193 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 DHCR24Q15392 516 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 ZYXQ15942 572 aaKnown RBP7.43□□□□□ -1.22
TRAV25-201ENST00000390454 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
TRAV25-201ENST00000390454 BBS9Q3SYG4 887 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 OVOS1Q6IE37 1185 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 CASC1Q6TDU7 716 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
TRAV25-201ENST00000390454 KIAA1211Q6ZU35 1233 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 GAS2L3Q86XJ1 694 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 SLC7A3Q8WY07 619 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 ATG4CQ96DT6 458 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 RASSF4Q9H2L5 321 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 CHST12Q9NRB3 414 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 ERBB4Q15303 1308 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 ZFYVE9O95405 1425 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 ASXL2Q76L83 1435 aa7.43□□□□□ -1.22
TRAV25-201ENST00000390454 ADGRB1O14514 1584 aa7.42□□□□□ -1.22
TRAV25-201ENST00000390454 LOC102724428A0A0B4J2F2 783 aa7.42□□□□□ -1.22
TRAV25-201ENST00000390454 A0A1W2PQU0 124 aa7.42□□□□□ -1.22
TRAV25-201ENST00000390454 NRDCO43847 1150 aa7.42□□□□□ -1.22
TRAV25-201ENST00000390454 BAG4O95429 457 aaKnown RBP7.42□□□□□ -1.22
TRAV25-201ENST00000390454 NBPF7P0C2Y1 421 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms