RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 SEMA5AQ13591 1074 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 LAMB3Q13751 1172 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SEMA3AQ14563 771 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 NBR1Q14596 966 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 RALGPS1Q5JS13 557 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 AGBL4Q5VU57 503 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 Q6ZSN1 163 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FAM35AQ86V20 835 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KRTAP7-1Q8IUC3 87 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SPACA3Q8IXA5 215 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 IL22RA1Q8N6P7 574 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SMG8Q8ND04 991 aaKnown RBP-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 REPS2Q8NFH8 660 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 C1orf216Q8TAB5 229 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ADAMTS17Q8TE56 1095 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZNF845Q96IR2 970 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PPP1R13BQ96KQ4 1090 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PTPN18Q99952 460 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 G6PC3Q9BUM1 346 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MOV10L1Q9BXT6 1211 aaKnown RBP-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CRISPLD2Q9H0B8 497 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DNAJC25Q9H1X3 360 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SUGCTQ9HAC7 445 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CDHR5Q9HBB8 845 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TAOK2Q9UL54 1235 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FZD1Q9UP38 647 aa-1.2□□□□□ -2.6
RNU6-1340P-201ENST00000384438 RNF213Q63HN8 5207 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KMT2AQ03164 3969 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PLSCR5A0PG75 271 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 WIPF3A6NGB9 483 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DYNC1LI2O43237 492 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 B4GALT3O60512 393 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 B4GALT2O60909 372 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SSTR3P32745 418 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FUSP35637 526 aaKnown RBP eCLIP-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 SARSP49591 514 aaKnown RBP-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 USP11P51784 963 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MLLT10P55197 1068 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TBC1D8BQ0IIM8 1120 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MAP7Q14244 749 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 GRIPAP1Q4V328 841 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 BORAQ6PGQ7 559 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 LRP11Q86VZ4 500 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PARP8Q8N3A8 854 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 C2CD4AQ8NCU7 369 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PPP1R13LQ8WUF5 828 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 LMLNQ96KR4 655 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FZD8Q9H461 694 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DHX33Q9H6R0 707 aaKnown RBP-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CCDC177Q9NQR7 707 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PDGFCQ9NRA1 345 aa-1.21□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CELSR1Q9NYQ6 3014 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 HIVEP3Q5T1R4 2406 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FAM208BQ5VWN6 2430 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 IFNL4K9M1U5 179 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FOXS1O43638 330 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 EXTL3O43909 919 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CDKL5O76039 1030 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ALPLP05186 524 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CPB1P15086 417 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ACRV1P26436 265 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DPYDQ12882 1025 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 DUSP4Q13115 394 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ADAM15Q13444 863 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KLF9Q13886 244 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 PCOLCEQ15113 449 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 NR0B2Q15466 257 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ETFDHQ16134 617 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 NKPD1Q17RQ9 610 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 RGL3Q3MIN7 710 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 ZNF772Q68DY9 489 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 KRT39Q6A163 491 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 OLFM4Q6UX06 510 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 MRGPREQ86SM8 312 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 C12orf50Q8NA57 414 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 FAM84BQ96KN1 310 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 RNF38Q9H0F5 515 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 C12orf49Q9H741 205 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CAAP1Q9H8G2 361 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CD93Q9NPY3 652 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 RBPJLQ9UBG7 517 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 TMEM59LQ9UK28 342 aa-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 POLR2AP24928 1970 aaKnown RBP-1.22□□□□□ -2.6
RNU6-1340P-201ENST00000384438 CACNA1EQ15878 2313 aa-1.22□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SETXQ7Z333 2677 aaKnown RBP-1.22□□□□□ -2.61
RNU6-1340P-201ENST00000384438 STARD9Q9P2P6 4700 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 MROH6A6NGR9 719 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TNFRSF10CO14798 259 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 OPLAHO14841 1288 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SRSF10O75494 262 aaKnown RBP-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 C1QL1O75973 258 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 IGLV2-14P01704 120 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ALOX5P09917 674 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 DRD2P14416 443 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 IL2RBP14784 551 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TYRP1P17643 537 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 CEBPBP17676 345 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 HK2P52789 917 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 NCKAP1LP55160 1127 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 NLRP12P59046 1061 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms