RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 ZNF408Q9H9D4 720 aa4.35□□□□□ -1.71
RNU6-48P-201ENST00000384161 PARD6AQ9NPB6 346 aa4.35□□□□□ -1.71
RNU6-48P-201ENST00000384161 ACTR10Q9NZ32 417 aa4.35□□□□□ -1.71
RNU6-48P-201ENST00000384161 PRR13Q9NZ81 148 aa4.35□□□□□ -1.71
RNU6-48P-201ENST00000384161 ZNF214Q9UL59 606 aaPredicted RBP4.35□□□□□ -1.71
RNU6-48P-201ENST00000384161 SMG5Q9UPR3 1016 aaKnown RBP4.35□□□□□ -1.71
RNU6-48P-201ENST00000384161 ETV2O00321 342 aaPredicted RBP4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 SMAD7O15105 426 aaKnown RBP4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 TMEM253P0C7T8 217 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 ITIH2P19823 946 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 POLR2BP30876 1174 aaKnown RBP4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 SLC7A5Q01650 507 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 IKZF1Q13422 519 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 NCAPHQ15003 741 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 FXNQ16595 210 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 CIAPIN1Q6FI81 312 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 TMPRSS7Q7RTY8 843 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 GGNQ86UU5 652 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 TMEM192Q8IY95 271 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 CKAP2LQ8IYA6 745 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 DTWD2Q8NBA8 298 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 DRC1Q96MC2 740 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 DIRC2Q96SL1 478 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 NSUN3Q9H649 340 aaKnown RBP4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 GPATCH2Q9NW75 528 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 MRVI1Q9Y6F6 885 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 CNTNAP4Q9C0A0 1308 aa4.34□□□□□ -1.71
RNU6-48P-201ENST00000384161 NAT2P11245 290 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 ETFBP38117 255 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 GDNFP39905 211 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 LINC00310P59036 64 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 TNK2Q07912 1038 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 RBL2Q08999 1139 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 NBPF9Q3BBW0 867 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 GNPTABQ3T906 1256 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 CCDC144CPQ8IYA2 1237 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 C7orf61Q8IZ16 206 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 FAM169BQ8N8A8 192 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 Q96M66 194 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 MKRN2Q9H000 416 aaKnown RBP4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 PPP1R1BQ9UD71 204 aaPredicted RBP4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 PCDHB12Q9Y5F1 795 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 ST14Q9Y5Y6 855 aa4.33□□□□□ -1.72
RNU6-48P-201ENST00000384161 LTBP3Q9NS15 1303 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 A0A087WZG4 1122 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 PRR33A8MZF0 331 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 U2SURPO15042 1029 aaKnown RBP4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 SRFP11831 508 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 GTF2F1P35269 517 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 ZNF143P52747 638 aaPredicted RBP4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 AUHQ13825 339 aaKnown RBP4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 TCEAL1Q15170 157 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 ZYXQ15942 572 aaKnown RBP4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 CLEC16AQ2KHT3 1053 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 CDKAL1Q5VV42 579 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 ANKS3Q6ZW76 656 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 HSPA12BQ96MM6 686 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 KCNC2Q96PR1 638 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 SEMA3GQ9NS98 782 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 FBXL21Q9UKT6 434 aa4.32□□□□□ -1.72
RNU6-48P-201ENST00000384161 FAM86C2PA6NEL3 165 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 KLF4O43474 513 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 NMIQ13287 307 aaPredicted RBP4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 HEATR6Q6AI08 1181 aaKnown RBP4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 VHLLQ6RSH7 139 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 TSPYL5Q86VY4 417 aaPredicted RBP4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 ZNF655Q8N720 491 aaPredicted RBP4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 DAGLBQ8NCG7 672 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 SYTL5Q8TDW5 730 aaPredicted RBP4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 UBXN4Q92575 508 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 UBE2FQ969M7 185 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 CCDC120Q96HB5 630 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 TRIM55Q9BYV6 548 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 GBP3Q9H0R5 595 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 DUSP15Q9H1R2 295 aaPredicted RBP4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 ZSWIM5Q9P217 1185 aa4.31□□□□□ -1.72
RNU6-48P-201ENST00000384161 ANKRD34BA5PLL1 514 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 TCAF2A6NFQ2 919 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 C9IYK1 514 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 H3BS24 57 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 SIGLEC6O43699 453 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 NUAK1O60285 661 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 LRRN2O75325 713 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 ITGA4P13612 1032 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 CD247P20963 164 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 ENDOUP21128 410 aaKnown RBP4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 TPP2P29144 1249 aaPredicted RBP4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 RAB33AQ14088 237 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 SKOR2Q2VWA4 1001 aaPredicted RBP4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 NOL9Q5SY16 702 aaKnown RBP4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 AXDND1Q5T1B0 1012 aaPredicted RBP4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 LARP1BQ659C4 914 aaKnown RBP4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 KIAA1211LQ6NV74 962 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 SYTL4Q96C24 671 aaPredicted RBP4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 ZNF512BQ96KM6 892 aaPredicted RBP4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 PRDM14Q9GZV8 571 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 EPN3Q9H201 632 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 SIRPGQ9P1W8 387 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 WHRNQ9P202 907 aa4.3□□□□□ -1.72
RNU6-48P-201ENST00000384161 DIS3Q9Y2L1 958 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms