RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 NCAPG2Q86XI2 1143 aa16.69■□□□□ 0.26
VLDLR-202ENST00000382099 GORASP1Q9BQQ3 440 aa16.69■□□□□ 0.26
VLDLR-202ENST00000382099 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
VLDLR-202ENST00000382099 FAM163BP0C2L3 166 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
VLDLR-202ENST00000382099 STOX1Q6ZVD7 989 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 SPICE1Q8N0Z3 855 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 STIM2Q9P246 746 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
VLDLR-202ENST00000382099 CEP170BQ9Y4F5 1589 aaPredicted RBP16.68■□□□□ 0.26
VLDLR-202ENST00000382099 RASSF10A6NK89 507 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 RNF225M0QZC1 329 aaPredicted RBP16.68■□□□□ 0.26
VLDLR-202ENST00000382099 LUC7L3O95232 432 aaKnown RBP16.68■□□□□ 0.26
VLDLR-202ENST00000382099 SMYD4Q8IYR2 804 aaPredicted RBP16.68■□□□□ 0.26
VLDLR-202ENST00000382099 SERTAD1Q9UHV2 236 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 GGA2Q9UJY4 613 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 C2CD2Q9Y426 696 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 CCDC51Q96ER9 411 aa16.68■□□□□ 0.26
VLDLR-202ENST00000382099 RBM41Q96IZ5 413 aaKnown RBP16.68■□□□□ 0.26
VLDLR-202ENST00000382099 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
VLDLR-202ENST00000382099 TOPAZ1Q8N9V7 1692 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 SPDYE5A6NIY4 337 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 FAM153BP0C7A2 387 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 AFMP43652 599 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 GCLCP48506 637 aaPredicted RBP16.67■□□□□ 0.26
VLDLR-202ENST00000382099 PAK2Q13177 524 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 FAM153CQ494X1 144 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 CCHCR1Q8TD31 782 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
VLDLR-202ENST00000382099 FAM153AQ9UHL3 310 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 USP6P35125 1406 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 PAPD7Q5XG87 772 aaKnown RBP16.67■□□□□ 0.26
VLDLR-202ENST00000382099 ANKRD23Q86SG2 305 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 MMADHCQ9H3L0 296 aaPredicted RBP16.67■□□□□ 0.26
VLDLR-202ENST00000382099 TAB2Q9NYJ8 693 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 AMOTL2Q9Y2J4 779 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 USP31Q70CQ4 1352 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 FMN2Q9NZ56 1722 aa16.67■□□□□ 0.26
VLDLR-202ENST00000382099 STXBP3O00186 592 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 DNAJC8O75937 253 aaPredicted RBP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 CARSP49589 748 aaKnown RBP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 GUCY2DQ02846 1103 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 HLTFQ14527 1009 aaKnown RBP eCLIP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 SPATA4Q8NEY3 305 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 GGT7Q9UJ14 662 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 ARHGEF10O15013 1369 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 ZPR1O75312 459 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 MAGEA8P43361 318 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 PIP4K2AP48426 406 aaPredicted RBP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 HDGFL1Q5TGJ6 251 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 ERICH1Q86X53 443 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 OR2W6PQ8NHA6 318 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 EPB41L5Q9HCM4 733 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 SLC5A4Q9NY91 659 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 ADD3Q9UEY8 706 aaKnown RBP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 SYNRGQ9UMZ2 1314 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 ZSCAN5CA6NGD5 496 aaPredicted RBP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 TRIM37O94972 964 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 ABL2P42684 1182 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 PAFAH1B1P43034 410 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 AIFM3Q96NN9 605 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 MED15Q96RN5 788 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 CTAGE1Q96RT6 745 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 AATFQ9NY61 560 aaKnown RBP eCLIP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 BLOC1S6Q9UL45 172 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 PLAAQ9Y263 795 aa16.66■□□□□ 0.26
VLDLR-202ENST00000382099 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
VLDLR-202ENST00000382099 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 HGSO14964 777 aaPredicted RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 ANKRD20A2Q5SQ80 823 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 ANKRD20A1Q5TYW2 823 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 ANKRD20A3Q5VUR7 823 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 CRELD2Q6UXH1 353 aaPredicted RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 SMCR8Q8TEV9 937 aaPredicted RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 PLEKHG4BQ96PX9 1271 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 CEP131Q9UPN4 1083 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 GCOM1H8Y6P7 765 aaPredicted RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 MYZAPP0CAP1 466 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 IMPDH2P12268 514 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 PLCD1P51178 756 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 KIF23Q02241 960 aaPredicted RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 ACBD5Q5T8D3 534 aaPredicted RBP16.65■□□□□ 0.26
VLDLR-202ENST00000382099 MFSD4BQ5TF39 518 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 UBE3BQ7Z3V4 1068 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 EYA1Q99502 592 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 AGLP35573 1532 aa16.65■□□□□ 0.26
VLDLR-202ENST00000382099 CYP27A1Q02318 531 aa16.64■□□□□ 0.26
VLDLR-202ENST00000382099 ITGB3BPQ13352 177 aaPredicted RBP16.64■□□□□ 0.26
VLDLR-202ENST00000382099 GLE1Q53GS7 698 aaKnown RBP16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms