RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 RIMBP2O15034 1052 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
GPNMB-202ENST00000381990 ISM2Q6H9L7 571 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 TOGARAM2Q6ZUX3 1019 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 MSANTD4Q8NCY6 345 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 TGFBRAP1Q8WUH2 860 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 DHX58Q96C10 678 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 GBP3Q9H0R5 595 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 RBM28Q9NW13 759 aaKnown RBP10.11□□□□□ -0.79
GPNMB-202ENST00000381990 PCDHA5Q9Y5H7 936 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 KIF5CO60282 957 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 GTF2IP78347 998 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 TROAPQ12815 778 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 SLC15A2Q16348 729 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 SRLQ86TD4 932 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 GOLGA6L1Q8N7Z2 621 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 PDILTQ8N807 584 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 RNF26Q9BY78 433 aaPredicted RBP10.11□□□□□ -0.79
GPNMB-202ENST00000381990 CDC23Q9UJX2 597 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 MYH6P13533 1939 aa10.11□□□□□ -0.79
GPNMB-202ENST00000381990 TSPY2A6NKD2 308 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 TNNT3P45378 269 aaPredicted RBP10.1□□□□□ -0.79
GPNMB-202ENST00000381990 LMAN1P49257 510 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 FAM47AQ5JRC9 791 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 BEND6Q5SZJ8 279 aaPredicted RBP10.1□□□□□ -0.79
GPNMB-202ENST00000381990 STYK1Q6J9G0 422 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 KANK3Q6NY19 840 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 C2CD5Q86YS7 1000 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 TEX11Q8IYF3 940 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
GPNMB-202ENST00000381990 CAMKK2Q96RR4 588 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 NFE2L3Q9Y4A8 694 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 AKR1B15C9JRZ8 316 aaPredicted RBP10.1□□□□□ -0.79
GPNMB-202ENST00000381990 H0YIN7 160 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 GUCY1A2P33402 732 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
GPNMB-202ENST00000381990 SAFBQ15424 915 aaKnown RBP eCLIP10.1□□□□□ -0.79
GPNMB-202ENST00000381990 LONRF3Q496Y0 759 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 MAPKAPK5Q8IW41 473 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 ZNF622Q969S3 477 aaKnown RBP eCLIP10.1□□□□□ -0.79
GPNMB-202ENST00000381990 EYA3Q99504 573 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 EPC1Q9H2F5 836 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 ACBD3Q9H3P7 528 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 STK32BQ9NY57 414 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 QSER1Q2KHR3 1735 aa10.1□□□□□ -0.79
GPNMB-202ENST00000381990 UBE2Q2LH0YL09 131 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 ERCC5P28715 1186 aaPredicted RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 RHBDL3P58872 404 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 AKAP17AQ02040 695 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 PDE4CQ08493 712 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 FUT2Q10981 343 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 NR1I3Q14994 352 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 POSTNQ15063 836 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 EZH2Q15910 746 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 CCDC178Q5BJE1 867 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 FOXP4Q8IVH2 680 aaPredicted RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 CCDC82Q8N4S0 544 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 A0A1B0GTH6 734 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 NMT2O60551 498 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 MMP1P03956 469 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 BMP6P22004 513 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 SARSP49591 514 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 TFAP4Q01664 338 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 SLC4A8Q2Y0W8 1093 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 CMTR1Q8N1G2 835 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 DYNLL2Q96FJ2 89 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 TRERF1Q96PN7 1200 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 ZNF287Q9HBT7 754 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 MYO1AQ9UBC5 1043 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 DDX60LQ5H9U9 1706 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 H3BQF6 201 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 PRPF3O43395 683 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 ADKP55263 362 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 GOLGA8FQ08AF8 430 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 GOLGA8DPQ0D2H9 430 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 MORC3Q14149 939 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 RCSD1Q6JBY9 416 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 DGKHQ86XP1 1220 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 ZNF579Q8NAF0 562 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 CTCFLQ8NI51 663 aaPredicted RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 ANKS1AQ92625 1134 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 CCDC51Q96ER9 411 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 CTAGE1Q96RT6 745 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 ANKZF1Q9H8Y5 726 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 MED4Q9NPJ6 270 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 SAP30BPQ9UHR5 308 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 MAN1B1Q9UKM7 699 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 L1RE1Q9UN81 338 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 RRP15Q9Y3B9 282 aaKnown RBP10.09□□□□□ -0.79
GPNMB-202ENST00000381990 DAGLAQ9Y4D2 1042 aa10.09□□□□□ -0.79
GPNMB-202ENST00000381990 G3V3G9 751 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 PLCD1P51178 756 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 HSP90B2PQ58FF3 399 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 DCAF8Q5TAQ9 597 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 TMTC3Q6ZXV5 915 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 NOSTRINQ8IVI9 506 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms