RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 PCDHA6Q9UN73 950 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 PCDHA8Q9Y5H6 950 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 PP2D1A8MPX8 630 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 M0R2N6 131 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 MYL5Q02045 173 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 GOLGA8FQ08AF8 430 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 GOLGA8DPQ0D2H9 430 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 SMARCE1Q969G3 411 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 MASTLQ96GX5 879 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 C16orf45Q96MC5 204 aaPredicted RBP19.54■□□□□ 0.72
PDX1-201ENST00000381033 BLZF1Q9H2G9 400 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 TMEM60Q9H2L4 133 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 YY1AP1Q9H869 796 aa19.54■□□□□ 0.72
PDX1-201ENST00000381033 GEMIN8Q9NWZ8 242 aaKnown RBP19.54■□□□□ 0.72
PDX1-201ENST00000381033 TMEM232C9JQI7 657 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 ALDH1B1P30837 517 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 PDE6BP35913 854 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 TCP10Q12799 353 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 APOBEC3HQ6NTF7 200 aaKnown RBP19.53■□□□□ 0.72
PDX1-201ENST00000381033 CDC42EP5Q6NZY7 148 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 PAGE5Q96GU1 130 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 PIGSQ96S52 555 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 SMTNL1A8MU46 457 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 IKBKBO14920 756 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 C2CD5Q86YS7 1000 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 SLF2Q8IX21 1173 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 C4orf32Q8N8J7 132 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 MTRQ99707 1265 aa19.53■□□□□ 0.72
PDX1-201ENST00000381033 PARP1P09874 1014 aaKnown RBP19.52■□□□□ 0.72
PDX1-201ENST00000381033 SKILP12757 684 aa19.52■□□□□ 0.72
PDX1-201ENST00000381033 CCZ1BP86790 482 aa19.52■□□□□ 0.72
PDX1-201ENST00000381033 CCZ1P86791 482 aaPredicted RBP19.52■□□□□ 0.72
PDX1-201ENST00000381033 GABPAQ06546 454 aa19.52■□□□□ 0.72
PDX1-201ENST00000381033 MORC3Q14149 939 aa19.52■□□□□ 0.72
PDX1-201ENST00000381033 BARHL2Q9NY43 387 aa19.52■□□□□ 0.72
PDX1-201ENST00000381033 SRCAPQ6ZRS2 3230 aa19.52■□□□□ 0.72
PDX1-201ENST00000381033 CD44P16070 742 aaKnown RBP19.52■□□□□ 0.71
PDX1-201ENST00000381033 SETQ01105 290 aaPredicted RBP19.52■□□□□ 0.71
PDX1-201ENST00000381033 NT5DC1Q5TFE4 455 aa19.52■□□□□ 0.71
PDX1-201ENST00000381033 ARMCX5Q6P1M9 558 aa19.52■□□□□ 0.71
PDX1-201ENST00000381033 ZNF287Q9HBT7 754 aa19.52■□□□□ 0.71
PDX1-201ENST00000381033 TERF1P54274 439 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 IRX5P78411 483 aaPredicted RBP19.51■□□□□ 0.71
PDX1-201ENST00000381033 KLHL10Q6JEL2 608 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 TMC4Q7Z404 712 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 FERMT2Q96AC1 680 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 PLIN2Q99541 437 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 SERPINC1P01008 464 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 SLFN14P0C7P3 912 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 STX17P56962 302 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 SAMSN1Q9NSI8 373 aaKnown RBP19.51■□□□□ 0.71
PDX1-201ENST00000381033 TRMT1Q9NXH9 659 aaKnown RBP19.51■□□□□ 0.71
PDX1-201ENST00000381033 MTMR4Q9NYA4 1195 aa19.51■□□□□ 0.71
PDX1-201ENST00000381033 CCDC194A0A1B0GVG4 234 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 CALML3P27482 149 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 GNAQP50148 359 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 UBASH3AP57075 661 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 ZNF772Q68DY9 489 aaPredicted RBP19.5■□□□□ 0.71
PDX1-201ENST00000381033 SPATA20Q8TB22 786 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 INTS13Q9NVM9 706 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 NFE2L3Q9Y4A8 694 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 NRXN2Q9P2S2 1712 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 SLX4Q8IY92 1834 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 PDHBP11177 359 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 TOP1P11387 765 aaKnown RBP19.5■□□□□ 0.71
PDX1-201ENST00000381033 NAPAP54920 295 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 ATP2B2Q01814 1243 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 EZH2Q15910 746 aaKnown RBP19.5■□□□□ 0.71
PDX1-201ENST00000381033 GPCPD1Q9NPB8 672 aa19.5■□□□□ 0.71
PDX1-201ENST00000381033 EN1Q05925 392 aaPredicted RBP19.49■□□□□ 0.71
PDX1-201ENST00000381033 KARSQ15046 597 aaKnown RBP19.49■□□□□ 0.71
PDX1-201ENST00000381033 E2F4Q16254 413 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 CFAP100Q494V2 611 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 SH3RF1Q7Z6J0 888 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 COA7Q96BR5 231 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 SERPINB13Q9UIV8 391 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 HOOK1Q9UJC3 728 aaKnown RBP19.49■□□□□ 0.71
PDX1-201ENST00000381033 SHMT1P34896 483 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 CCDC178Q5BJE1 867 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 SH3GLB2Q9NR46 395 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 TMEM260Q9NX78 707 aa19.49■□□□□ 0.71
PDX1-201ENST00000381033 SMCO2A6NFE2 343 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 MPHOSPH10O00566 681 aaKnown RBP19.48■□□□□ 0.71
PDX1-201ENST00000381033 RXRBP28702 533 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 CRKP46108 304 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 RBM5P52756 815 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDX1-201ENST00000381033 CUL4BQ13620 913 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 TTBK2Q6IQ55 1244 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 OSBPL5Q9H0X9 879 aaPredicted RBP19.48■□□□□ 0.71
PDX1-201ENST00000381033 BIN2Q9UBW5 565 aaPredicted RBP19.48■□□□□ 0.71
PDX1-201ENST00000381033 TPM4P67936 248 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 DPYDQ12882 1025 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 AOC3Q16853 763 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 ELOA2Q8IYF1 753 aaPredicted RBP19.48■□□□□ 0.71
PDX1-201ENST00000381033 TEKT1Q969V4 418 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 DNAJC18Q9H819 358 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 CGNQ9P2M7 1197 aaKnown RBP19.48■□□□□ 0.71
PDX1-201ENST00000381033 SH3BP1Q9Y3L3 701 aa19.48■□□□□ 0.71
PDX1-201ENST00000381033 FOCADQ5VW36 1801 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms