RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RPAINQ86UA6 219 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 AFAP1L1Q8TED9 768 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 TRIM47Q96LD4 638 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 MTRQ99707 1265 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 KCNJ18B7U540 433 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 KCNQ2O43526 872 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 PRCPP42785 496 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 PMS1P54277 932 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 KCNJ12Q14500 433 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 INF2Q27J81 1249 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 ERFEQ4G0M1 354 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 CELF1Q92879 486 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 SAP30BPQ9UHR5 308 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 FAM169AQ9Y6X4 670 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 WDR19Q8NEZ3 1342 aa13.97□□□□□ -0.17
PRPF40B-202ENST00000380281 KIF1CO43896 1103 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 RAD21O60216 631 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 FAM182BQ5T319 152 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 TMTC2Q8N394 836 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 CAGE1Q8TC20 777 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 HNRNPLLQ8WVV9 542 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 DUSP10Q9Y6W6 482 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 CTAGE15A4D2H0 777 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 CTAGE8P0CG41 777 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 COPB1P53618 953 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 PAK1Q13153 545 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 IL17AQ16552 155 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 KIAA1328Q86T90 577 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 CTAGE6Q86UF2 777 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 CTAGE4Q8IX94 777 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 ANKRD13CQ8N6S4 541 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 CDC23Q9UJX2 597 aa13.96□□□□□ -0.17
PRPF40B-202ENST00000380281 USP17L3A6NCW0 530 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 USP17L4A6NCW7 530 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 GOLGA6L9A6NEM1 432 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 NKRFO15226 690 aaKnown RBP eCLIP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 SEC23AQ15436 765 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 ALX1Q15699 326 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 CAVIN4Q5BKX8 364 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 TTC19Q6DKK2 380 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 USP17L1Q7RTZ2 530 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 CDHR2Q9BYE9 1310 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 TTC26A0AVF1 554 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 ZNF185O15231 689 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 ERCC5P28715 1186 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 TSR1Q2NL82 804 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 GBP6Q6ZN66 633 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 APTXQ7Z2E3 356 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 ANKRD18AQ8IVF6 992 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 RNF26Q9BY78 433 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 B4DLN1 442 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 TRIM21P19474 475 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 CCDC122Q5T0U0 273 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 EGFL6Q8IUX8 553 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 GNL3LQ9NVN8 582 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 SAMM50Q9Y512 469 aa13.95□□□□□ -0.18
PRPF40B-202ENST00000380281 FAM237AA0A1B0GTK4 181 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 MYO1FO00160 1098 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 UBA7P41226 1012 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 TROAPQ12815 778 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 ZNF34Q8IZ26 560 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 NAPGQ99747 312 aaPredicted RBP13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 JADE2Q9NQC1 790 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 SMARCAL1Q9NZC9 954 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 RAB21Q9UL25 225 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 MYH15Q9Y2K3 1946 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 CCDC194A0A1B0GVG4 234 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 GNAT2P19087 354 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 USP5P45974 858 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 TFAP4Q01664 338 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 DIXDC1Q155Q3 683 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 KRT26Q7Z3Y9 468 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 GIMAP7Q8NHV1 300 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 SMARCC1Q92922 1105 aaPredicted RBP13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 CD248Q9HCU0 757 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 ABHD10Q9NUJ1 306 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 AGPAT5Q9NUQ2 364 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 FAM205AQ6ZU69 1335 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 STK36Q9NRP7 1315 aa13.94□□□□□ -0.18
PRPF40B-202ENST00000380281 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 CXCR5P32302 372 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 PTPROQ16827 1216 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 TXNRD3Q86VQ6 643 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 CNGA4Q8IV77 575 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 CCDC87Q9NVE4 849 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 KCPQ6ZWJ8 1503 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 RPN1P04843 607 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 ITPK1Q13572 414 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 LETM2Q2VYF4 491 aa13.93□□□□□ -0.18
PRPF40B-202ENST00000380281 MKNK2Q9HBH9 465 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms