RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 CCDC47Q96A33 483 aaKnown RBP12.96□□□□□ -0.33
SEC23B-204ENST00000377475 RASSF4Q9H2L5 321 aa12.96□□□□□ -0.33
SEC23B-204ENST00000377475 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
SEC23B-204ENST00000377475 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEC23B-204ENST00000377475 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.33
SEC23B-204ENST00000377475 SAR1BQ9Y6B6 198 aa12.96□□□□□ -0.33
SEC23B-204ENST00000377475 XDHP47989 1333 aa12.96□□□□□ -0.34
SEC23B-204ENST00000377475 NCK2O43639 380 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 FCER1AP12319 257 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 SCG2P13521 617 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 CCDC70Q6NSX1 233 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 DNAAF5Q86Y56 855 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 CELF1Q92879 486 aaKnown RBP12.95□□□□□ -0.34
SEC23B-204ENST00000377475 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 SAMM50Q9Y512 469 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 ESYT3A0FGR9 886 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
SEC23B-204ENST00000377475 RNF40O75150 1001 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 TUBB4AP04350 444 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 GNAT2P19087 354 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
SEC23B-204ENST00000377475 PIP4K2BP78356 416 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 KIF5AQ12840 1032 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 TCP11X2Q5H9J9 407 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 NELFCDQ8IXH7 590 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 TGFBRAP1Q8WUH2 860 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 SHISA4Q96DD7 197 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 MLXIPQ9HAP2 919 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 STAG1Q8WVM7 1258 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 RNF26Q9BY78 433 aaPredicted RBP12.95□□□□□ -0.34
SEC23B-204ENST00000377475 EHD4Q9H223 541 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 TMEM60Q9H2L4 133 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 LRWD1Q9UFC0 647 aa12.95□□□□□ -0.34
SEC23B-204ENST00000377475 RRP15Q9Y3B9 282 aaKnown RBP12.95□□□□□ -0.34
SEC23B-204ENST00000377475 H0YHG0 523 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 GUCY2FP51841 1108 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
SEC23B-204ENST00000377475 EZH2Q15910 746 aaKnown RBP12.94□□□□□ -0.34
SEC23B-204ENST00000377475 PKN1Q16512 942 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 CCDC155Q8N6L0 562 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 GSDMAQ96QA5 445 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
SEC23B-204ENST00000377475 LACRTQ9GZZ8 138 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 KCNQ2O43526 872 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
SEC23B-204ENST00000377475 BRD3Q15059 726 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 RRAGAQ7L523 313 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 PNMA1Q8ND90 353 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 TUBGCP2Q9BSJ2 902 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 FRMPD2Q68DX3 1309 aaPredicted RBP12.94□□□□□ -0.34
SEC23B-204ENST00000377475 NALCNQ8IZF0 1738 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 KRT86O43790 486 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 MOCS3O95396 460 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 KRT18P05783 430 aaKnown RBP12.94□□□□□ -0.34
SEC23B-204ENST00000377475 EPS15P42566 896 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 FCHSD1Q86WN1 690 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 BLIDQ8IZY5 108 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
SEC23B-204ENST00000377475 TNNI2P48788 182 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.34
SEC23B-204ENST00000377475 USP17L2Q6R6M4 530 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 RSRC2Q7L4I2 434 aaKnown RBP12.93□□□□□ -0.34
SEC23B-204ENST00000377475 CLEC10AQ8IUN9 316 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 AMOTL1Q8IY63 956 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 FERMT2Q96AC1 680 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 CLSTN1O94985 981 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 ACTN2P35609 894 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 LIG3P49916 1009 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 MECOMQ03112 1051 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 BEND6Q5SZJ8 279 aaPredicted RBP12.93□□□□□ -0.34
SEC23B-204ENST00000377475 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.93□□□□□ -0.34
SEC23B-204ENST00000377475 TRIML1Q8N9V2 468 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 GBP3Q9H0R5 595 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 TSPYL1Q9H0U9 437 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.93□□□□□ -0.34
SEC23B-204ENST00000377475 PACSIN2Q9UNF0 486 aaPredicted RBP12.93□□□□□ -0.34
SEC23B-204ENST00000377475 MPHOSPH10O00566 681 aaKnown RBP12.93□□□□□ -0.34
SEC23B-204ENST00000377475 CCT5P48643 541 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 VGLL2Q8N8G2 317 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 GPCPD1Q9NPB8 672 aa12.93□□□□□ -0.34
SEC23B-204ENST00000377475 NKRFO15226 690 aaKnown RBP eCLIP12.92□□□□□ -0.34
SEC23B-204ENST00000377475 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
SEC23B-204ENST00000377475 SPAG1Q07617 926 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 E2F4Q16254 413 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 NBPF5PQ86XG9 351 aaPredicted RBP12.92□□□□□ -0.34
SEC23B-204ENST00000377475 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 AFAP1L1Q8TED9 768 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 FEZ2Q9UHY8 353 aaPredicted RBP12.92□□□□□ -0.34
SEC23B-204ENST00000377475 FAM205AQ6ZU69 1335 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 HPDP32754 393 aaPredicted RBP12.92□□□□□ -0.34
SEC23B-204ENST00000377475 KIF5BP33176 963 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 GGCXP38435 758 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 SARSP49591 514 aaKnown RBP12.92□□□□□ -0.34
SEC23B-204ENST00000377475 IKQ13123 557 aaPredicted RBP12.92□□□□□ -0.34
SEC23B-204ENST00000377475 GPATCH11Q8N954 259 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 CNOT6LQ96LI5 555 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms