RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 CATSPERGQ6ZRH7 1159 aa24.74■■□□□ 1.55
CBWD3-202ENST00000377342 PAXIP1Q6ZW49 1069 aaPredicted RBP24.74■■□□□ 1.55
CBWD3-202ENST00000377342 SMARCC2Q8TAQ2 1214 aa24.74■■□□□ 1.55
CBWD3-202ENST00000377342 PTPN18Q99952 460 aa24.74■■□□□ 1.55
CBWD3-202ENST00000377342 LZTS2Q9BRK4 669 aa24.74■■□□□ 1.55
CBWD3-202ENST00000377342 RIOX1Q9H6W3 641 aa24.74■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L15C9J2P7 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L13C9JLJ4 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L11C9JVI0 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L18D6R9N7 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L22D6RA61 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L17D6RBQ6 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L19D6RCP7 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L20D6RJB6 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 HOXA7P31268 230 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-202ENST00000377342 USP17L24Q0WX57 530 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 SYDE2Q5VT97 1194 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 ADGRF4Q8IZF3 695 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 CAPNS2Q96L46 248 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 LLPHQ9BRT6 129 aaKnown RBP24.73■■□□□ 1.55
CBWD3-202ENST00000377342 PRR12Q9ULL5 1215 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 SMCHD1A6NHR9 2005 aa24.73■■□□□ 1.55
CBWD3-202ENST00000377342 MANSC4A6NHS7 340 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-202ENST00000377342 BTBD19C9JJ37 291 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 FLOT1O75955 427 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 SMARCA1P28370 1054 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 SLC4A3P48751 1232 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 FAM160B2Q86V87 743 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 SLF1Q9BQI6 1058 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 JMJD4Q9H9V9 463 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 PPP1R9AQ9ULJ8 1098 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 IKQ13123 557 aaPredicted RBP24.72■■□□□ 1.55
CBWD3-202ENST00000377342 GRM1Q13255 1194 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 FAM43AQ8N2R8 423 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 MTMR8Q96EF0 704 aa24.72■■□□□ 1.55
CBWD3-202ENST00000377342 INTS4Q96HW7 963 aaKnown RBP24.72■■□□□ 1.55
CBWD3-202ENST00000377342 STK36Q9NRP7 1315 aa24.71■■□□□ 1.55
CBWD3-202ENST00000377342 hCG_1642624A0A1W2PR95 340 aa24.71■■□□□ 1.55
CBWD3-202ENST00000377342 CDKL5O76039 1030 aa24.71■■□□□ 1.55
CBWD3-202ENST00000377342 FMNL1O95466 1100 aaPredicted RBP24.71■■□□□ 1.55
CBWD3-202ENST00000377342 FDPSP14324 419 aaKnown RBP24.71■■□□□ 1.55
CBWD3-202ENST00000377342 C1QTNF8P60827 252 aa24.71■■□□□ 1.55
CBWD3-202ENST00000377342 CPLX2Q6PUV4 134 aaKnown RBP24.71■■□□□ 1.55
CBWD3-202ENST00000377342 ANKRD23Q86SG2 305 aa24.71■■□□□ 1.55
CBWD3-202ENST00000377342 CHURC1Q8WUH1 139 aa24.71■■□□□ 1.55
CBWD3-202ENST00000377342 KIFC2Q96AC6 838 aa24.71■■□□□ 1.55
CBWD3-202ENST00000377342 RNF26Q9BY78 433 aaPredicted RBP24.71■■□□□ 1.55
CBWD3-202ENST00000377342 FOXD4L1Q9NU39 408 aa24.71■■□□□ 1.55
CBWD3-202ENST00000377342 IGF2BP3O00425 579 aaKnown RBP eCLIP24.7■■□□□ 1.54
CBWD3-202ENST00000377342 POTEEQ6S8J3 1075 aa24.7■■□□□ 1.54
CBWD3-202ENST00000377342 PIGSQ96S52 555 aa24.7■■□□□ 1.54
CBWD3-202ENST00000377342 SLC26A6Q9BXS9 759 aa24.7■■□□□ 1.54
CBWD3-202ENST00000377342 ASCC2Q9H1I8 757 aaPredicted RBP24.7■■□□□ 1.54
CBWD3-202ENST00000377342 SPDYE16A6NNV3 312 aaPredicted RBP24.69■■□□□ 1.54
CBWD3-202ENST00000377342 PRPF38AQ8NAV1 312 aaKnown RBP24.69■■□□□ 1.54
CBWD3-202ENST00000377342 PIBF1Q8WXW3 757 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 ATG4CQ96DT6 458 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 DDX11Q96FC9 970 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 SLC45A1Q9Y2W3 748 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 MYPNQ86TC9 1320 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 AOC2O75106 756 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 DSG3P32926 999 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 SNAP25P60880 206 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 NOGQ13253 232 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 PKN1Q16512 942 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 CDC37Q16543 378 aaPredicted RBP24.69■■□□□ 1.54
CBWD3-202ENST00000377342 SAMD1Q6SPF0 538 aaPredicted RBP24.69■■□□□ 1.54
CBWD3-202ENST00000377342 HOMER1Q86YM7 354 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 RANBP17Q9H2T7 1088 aaKnown RBP24.69■■□□□ 1.54
CBWD3-202ENST00000377342 VAT1LQ9HCJ6 419 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 ADAMTS5Q9UNA0 930 aa24.69■■□□□ 1.54
CBWD3-202ENST00000377342 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.69■■□□□ 1.54
CBWD3-202ENST00000377342 PDHXO00330 501 aa24.68■■□□□ 1.54
CBWD3-202ENST00000377342 PRPF3O43395 683 aaKnown RBP24.68■■□□□ 1.54
CBWD3-202ENST00000377342 HSPA6P17066 643 aa24.68■■□□□ 1.54
CBWD3-202ENST00000377342 KIF23Q02241 960 aaPredicted RBP24.68■■□□□ 1.54
CBWD3-202ENST00000377342 SSRP1Q08945 709 aaKnown RBP24.68■■□□□ 1.54
CBWD3-202ENST00000377342 COG2Q14746 738 aa24.68■■□□□ 1.54
CBWD3-202ENST00000377342 V9GY48 417 aaPredicted RBP24.68■■□□□ 1.54
CBWD3-202ENST00000377342 PPP1R11O60927 126 aaPredicted RBP24.67■■□□□ 1.54
CBWD3-202ENST00000377342 IRX3P78415 501 aaPredicted RBP24.67■■□□□ 1.54
CBWD3-202ENST00000377342 PABPC4Q13310 644 aaKnown RBP eCLIP24.67■■□□□ 1.54
CBWD3-202ENST00000377342 SPRYD3Q8NCJ5 442 aa24.67■■□□□ 1.54
CBWD3-202ENST00000377342 AIFM3Q96NN9 605 aa24.67■■□□□ 1.54
CBWD3-202ENST00000377342 ORC3Q9UBD5 711 aaPredicted RBP24.67■■□□□ 1.54
CBWD3-202ENST00000377342 VEGFBP49765 207 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 QRICH1Q2TAL8 776 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 TRIM22Q8IYM9 498 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 REPS2Q8NFH8 660 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 RRP36Q96EU6 259 aaKnown RBP24.66■■□□□ 1.54
CBWD3-202ENST00000377342 P2RX7Q99572 595 aaKnown RBP24.66■■□□□ 1.54
CBWD3-202ENST00000377342 SLC38A10Q9HBR0 1119 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 WDR33Q9C0J8 1336 aaKnown RBP24.66■■□□□ 1.54
CBWD3-202ENST00000377342 RBBP6Q7Z6E9 1792 aaKnown RBP24.66■■□□□ 1.54
CBWD3-202ENST00000377342 VWA5AO00534 786 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 ZBTB5O15062 677 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 CYP2C8P10632 490 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 GJB2P29033 226 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 HERVK_113P62684 666 aa24.66■■□□□ 1.54
CBWD3-202ENST00000377342 HMGN5P82970 282 aaKnown RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms