RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 DEFB115Q30KQ5 88 aa20.7■□□□□ 0.9
HLA-A-203ENST00000376809 INTS4Q96HW7 963 aaKnown RBP20.7■□□□□ 0.9
HLA-A-203ENST00000376809 MS4A4AQ96JQ5 239 aa20.7■□□□□ 0.9
HLA-A-203ENST00000376809 SMC3Q9UQE7 1217 aa20.7■□□□□ 0.9
HLA-A-203ENST00000376809 hCG_1642624A0A1W2PR95 340 aa20.69■□□□□ 0.9
HLA-A-203ENST00000376809 FASTKD5Q7L8L6 764 aaKnown RBP20.69■□□□□ 0.9
HLA-A-203ENST00000376809 ADGRF4Q8IZF3 695 aa20.69■□□□□ 0.9
HLA-A-203ENST00000376809 SPZ1Q9BXG8 430 aa20.69■□□□□ 0.9
HLA-A-203ENST00000376809 FEM1BQ9UK73 627 aa20.69■□□□□ 0.9
HLA-A-203ENST00000376809 CCL15-CCL14A0A0B4J2E2 113 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 FLOT1O75955 427 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 CETPP11597 493 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 SSRP1Q08945 709 aaKnown RBP20.68■□□□□ 0.9
HLA-A-203ENST00000376809 CCL15Q16663 113 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 SYDE2Q5VT97 1194 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 BTNL9Q6UXG8 535 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 TRIM22Q8IYM9 498 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 SMARCC2Q8TAQ2 1214 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 CHURC1Q8WUH1 139 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 KIFC2Q96AC6 838 aa20.68■□□□□ 0.9
HLA-A-203ENST00000376809 FAM155AB1AL88 458 aaPredicted RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 FMNL1O95466 1100 aaPredicted RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 SMARCA1P28370 1054 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 GJB2P29033 226 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 AKAP17AQ02040 695 aaKnown RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 CYP4F22Q6NT55 531 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 FAM160B2Q86V87 743 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 HOMER1Q86YM7 354 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 RNF26Q9BY78 433 aaPredicted RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 RIOX1Q9H6W3 641 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 ORC3Q9UBD5 711 aaPredicted RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 PRR12Q9ULL5 1215 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 AGTPBP1Q9UPW5 1226 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 V9GY48 417 aaPredicted RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 COL11A1P12107 1806 aaPredicted RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L15C9J2P7 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L13C9JLJ4 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L11C9JVI0 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L18D6R9N7 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L22D6RA61 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L17D6RBQ6 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L19D6RCP7 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L20D6RJB6 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 FDPSP14324 419 aaKnown RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 HMGN5P82970 282 aaKnown RBP20.67■□□□□ 0.9
HLA-A-203ENST00000376809 USP17L24Q0WX57 530 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 CATSPERGQ6ZRH7 1159 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 BRI3BPQ8WY22 251 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 PIGSQ96S52 555 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 SLF1Q9BQI6 1058 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 JMJD4Q9H9V9 463 aa20.67■□□□□ 0.9
HLA-A-203ENST00000376809 PRPF3O43395 683 aaKnown RBP20.66■□□□□ 0.9
HLA-A-203ENST00000376809 PLA2G6O60733 806 aa20.66■□□□□ 0.9
HLA-A-203ENST00000376809 SNAP25P60880 206 aa20.66■□□□□ 0.9
HLA-A-203ENST00000376809 GPAT2Q6NUI2 795 aa20.66■□□□□ 0.9
HLA-A-203ENST00000376809 STK36Q9NRP7 1315 aa20.66■□□□□ 0.9
HLA-A-203ENST00000376809 HTRA3P83110 453 aa20.65■□□□□ 0.9
HLA-A-203ENST00000376809 PRPF38AQ8NAV1 312 aaKnown RBP20.65■□□□□ 0.9
HLA-A-203ENST00000376809 FAM184AQ8NB25 1140 aa20.65■□□□□ 0.9
HLA-A-203ENST00000376809 RRP36Q96EU6 259 aaKnown RBP20.65■□□□□ 0.9
HLA-A-203ENST00000376809 PPP1R9AQ9ULJ8 1098 aa20.65■□□□□ 0.9
HLA-A-203ENST00000376809 SMCHD1A6NHR9 2005 aa20.65■□□□□ 0.9
HLA-A-203ENST00000376809 MANSC4A6NHS7 340 aaPredicted RBP20.64■□□□□ 0.9
HLA-A-203ENST00000376809 DEXIO95424 95 aa20.64■□□□□ 0.9
HLA-A-203ENST00000376809 HOXA7P31268 230 aaPredicted RBP20.64■□□□□ 0.9
HLA-A-203ENST00000376809 AIFM3Q96NN9 605 aa20.64■□□□□ 0.9
HLA-A-203ENST00000376809 SEC63Q9UGP8 760 aaKnown RBP20.64■□□□□ 0.9
HLA-A-203ENST00000376809 BTBD19C9JJ37 291 aa20.64■□□□□ 0.89
HLA-A-203ENST00000376809 FOSBP53539 338 aa20.64■□□□□ 0.89
HLA-A-203ENST00000376809 IRX3P78415 501 aaPredicted RBP20.64■□□□□ 0.89
HLA-A-203ENST00000376809 PABPC4Q13310 644 aaKnown RBP eCLIP20.64■□□□□ 0.89
HLA-A-203ENST00000376809 COG2Q14746 738 aa20.64■□□□□ 0.89
HLA-A-203ENST00000376809 CDC37Q16543 378 aaPredicted RBP20.64■□□□□ 0.89
HLA-A-203ENST00000376809 ATG4CQ96DT6 458 aa20.64■□□□□ 0.89
HLA-A-203ENST00000376809 DSG3P32926 999 aa20.63■□□□□ 0.89
HLA-A-203ENST00000376809 NOGQ13253 232 aa20.63■□□□□ 0.89
HLA-A-203ENST00000376809 PKN1Q16512 942 aa20.63■□□□□ 0.89
HLA-A-203ENST00000376809 MTMR8Q96EF0 704 aa20.63■□□□□ 0.89
HLA-A-203ENST00000376809 CAPNS2Q96L46 248 aa20.63■□□□□ 0.89
HLA-A-203ENST00000376809 PTPN18Q99952 460 aa20.63■□□□□ 0.89
HLA-A-203ENST00000376809 ASCC2Q9H1I8 757 aaPredicted RBP20.63■□□□□ 0.89
HLA-A-203ENST00000376809 RBM27Q9P2N5 1060 aaKnown RBP20.63■□□□□ 0.89
HLA-A-203ENST00000376809 ZBTB5O15062 677 aa20.62■□□□□ 0.89
HLA-A-203ENST00000376809 SCG2P13521 617 aa20.62■□□□□ 0.89
HLA-A-203ENST00000376809 QRICH1Q2TAL8 776 aa20.62■□□□□ 0.89
HLA-A-203ENST00000376809 CCDC174Q6PII3 467 aa20.62■□□□□ 0.89
HLA-A-203ENST00000376809 ANKRD23Q86SG2 305 aa20.62■□□□□ 0.89
HLA-A-203ENST00000376809 FAM43AQ8N2R8 423 aa20.62■□□□□ 0.89
HLA-A-203ENST00000376809 GPKOWQ92917 476 aaPredicted RBP eCLIP20.62■□□□□ 0.89
HLA-A-203ENST00000376809 ZIC5Q96T25 663 aa20.62■□□□□ 0.89
HLA-A-203ENST00000376809 ALG1Q9BT22 464 aa20.62■□□□□ 0.89
HLA-A-203ENST00000376809 RANBP17Q9H2T7 1088 aaKnown RBP20.62■□□□□ 0.89
HLA-A-203ENST00000376809 PNMA6FA0A0J9YX94 578 aa20.61■□□□□ 0.89
HLA-A-203ENST00000376809 TESPA1A2RU30 521 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-203ENST00000376809 SPDYE16A6NNV3 312 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-203ENST00000376809 PDHXO00330 501 aa20.61■□□□□ 0.89
HLA-A-203ENST00000376809 OSBPP22059 807 aa20.61■□□□□ 0.89
HLA-A-203ENST00000376809 PFKFB3Q16875 520 aaPredicted RBP20.61■□□□□ 0.89
HLA-A-203ENST00000376809 WASF1Q92558 559 aa20.61■□□□□ 0.89
HLA-A-203ENST00000376809 P2RX7Q99572 595 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms