RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 POLRMTO00411 1230 aaKnown RBP14.56□□□□□ -0.08
MSH5-204ENST00000375755 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
MSH5-204ENST00000375755 MFSD6Q6ZSS7 791 aa14.56□□□□□ -0.08
MSH5-204ENST00000375755 RPGRQ92834 1020 aaKnown RBP14.56□□□□□ -0.08
MSH5-204ENST00000375755 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
MSH5-204ENST00000375755 ZC3H4Q9UPT8 1303 aaKnown RBP14.56□□□□□ -0.08
MSH5-204ENST00000375755 APBA3O96018 575 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 SARSP49591 514 aaKnown RBP14.55□□□□□ -0.08
MSH5-204ENST00000375755 GRIN1Q05586 938 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 PPARAQ07869 468 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 SLC27A3Q5K4L6 730 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 APOA5Q6Q788 366 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.55□□□□□ -0.08
MSH5-204ENST00000375755 HOOK1Q9UJC3 728 aaKnown RBP14.55□□□□□ -0.08
MSH5-204ENST00000375755 IFIT3O14879 490 aaKnown RBP14.55□□□□□ -0.08
MSH5-204ENST00000375755 MFAP3LO75121 409 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 CYP2D6P10635 497 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 MSL1Q68DK7 614 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 COL23A1Q86Y22 540 aaPredicted RBP14.55□□□□□ -0.08
MSH5-204ENST00000375755 CCDC82Q8N4S0 544 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 VIPAS39Q9H9C1 493 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 SERTAD1Q9UHV2 236 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 HPCAL4Q9UM19 191 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 TUBBP07437 444 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 ADRA2BP18089 450 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 PBX1P40424 430 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 PSEN1P49768 467 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 LIG3P49916 1009 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 AMPD2Q01433 879 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 DIXDC1Q155Q3 683 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 NT5DC1Q5TFE4 455 aa14.55□□□□□ -0.08
MSH5-204ENST00000375755 FAM217BQ9NTX9 383 aaPredicted RBP14.55□□□□□ -0.08
MSH5-204ENST00000375755 CASP14P31944 242 aa14.54□□□□□ -0.08
MSH5-204ENST00000375755 ARHGAP25P42331 645 aa14.54□□□□□ -0.08
MSH5-204ENST00000375755 METAP2P50579 478 aaKnown RBP eCLIP14.54□□□□□ -0.08
MSH5-204ENST00000375755 AKAP17AQ02040 695 aaKnown RBP14.54□□□□□ -0.08
MSH5-204ENST00000375755 DACH1Q9UI36 760 aa14.54□□□□□ -0.08
MSH5-204ENST00000375755 MYO6Q9UM54 1294 aa14.54□□□□□ -0.08
MSH5-204ENST00000375755 POLR2DO15514 142 aaKnown RBP14.54□□□□□ -0.08
MSH5-204ENST00000375755 KRI1Q8N9T8 703 aaKnown RBP14.54□□□□□ -0.08
MSH5-204ENST00000375755 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
MSH5-204ENST00000375755 CEP89Q96ST8 783 aa14.54□□□□□ -0.08
MSH5-204ENST00000375755 NACAP1Q9BZK3 213 aa14.54□□□□□ -0.08
MSH5-204ENST00000375755 TTF2Q9UNY4 1162 aaKnown RBP14.54□□□□□ -0.08
MSH5-204ENST00000375755 RGPD3A6NKT7 1758 aaPredicted RBP14.53□□□□□ -0.08
MSH5-204ENST00000375755 RGPD4Q7Z3J3 1758 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 RANBP6O60518 1105 aaKnown RBP14.53□□□□□ -0.08
MSH5-204ENST00000375755 FXR1P51114 621 aaKnown RBP eCLIP14.53□□□□□ -0.08
MSH5-204ENST00000375755 PLCD1P51178 756 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 CRY2Q49AN0 593 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.53□□□□□ -0.08
MSH5-204ENST00000375755 ELOA2Q8IYF1 753 aaPredicted RBP14.53□□□□□ -0.08
MSH5-204ENST00000375755 GDAP1L1Q96MZ0 367 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 ERLIN2O94905 339 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 GNAT2P19087 354 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 CCT5P48643 541 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 CCDC91Q7Z6B0 441 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 STAG1Q8WVM7 1258 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 ECM29Q5VYK3 1845 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 ZMYM6O95789 1325 aa14.53□□□□□ -0.08
MSH5-204ENST00000375755 USP17L12C9JPN9 530 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 USP17L21D6R901 530 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 UFL1O94874 794 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 GYPCP04921 128 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 USP14P54578 494 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 GSCP56915 257 aaPredicted RBP14.52□□□□□ -0.08
MSH5-204ENST00000375755 ERVK-24P63145 666 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 CCDC148Q8NFR7 591 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 ADD3Q9UEY8 706 aaKnown RBP14.52□□□□□ -0.08
MSH5-204ENST00000375755 POLLQ9UGP5 575 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 TIAM2Q8IVF5 1701 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 SHOX2O60902 331 aaPredicted RBP14.52□□□□□ -0.08
MSH5-204ENST00000375755 STX17P56962 302 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 KAT14Q9H8E8 782 aa14.52□□□□□ -0.08
MSH5-204ENST00000375755 ZBTB43O43298 467 aa14.52□□□□□ -0.09
MSH5-204ENST00000375755 NMT2O60551 498 aa14.52□□□□□ -0.09
MSH5-204ENST00000375755 GUCY1A2P33402 732 aa14.52□□□□□ -0.09
MSH5-204ENST00000375755 GGCXP38435 758 aa14.52□□□□□ -0.09
MSH5-204ENST00000375755 EHD4Q9H223 541 aa14.52□□□□□ -0.09
MSH5-204ENST00000375755 XDHP47989 1333 aa14.52□□□□□ -0.09
MSH5-204ENST00000375755 STIM1Q13586 685 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 NTRK3Q16288 839 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 FBXW10Q5XX13 1052 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 KLHL10Q6JEL2 608 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 KCNV1Q6PIU1 500 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 FAM169AQ9Y6X4 670 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 WDR19Q8NEZ3 1342 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 CCDC88AQ3V6T2 1871 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 ANKRD31Q8N7Z5 1873 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 GOLGA8AA7E2F4 631 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 FECHP22830 423 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 ERCC5P28715 1186 aaPredicted RBP14.51□□□□□ -0.09
MSH5-204ENST00000375755 HNRNPH1P31943 449 aaKnown RBP14.51□□□□□ -0.09
MSH5-204ENST00000375755 COG1Q8WTW3 980 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 FAM107BQ9H098 131 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 CXorf56Q9H5V9 222 aa14.51□□□□□ -0.09
MSH5-204ENST00000375755 RNF225M0QZC1 329 aaPredicted RBP14.5□□□□□ -0.09
MSH5-204ENST00000375755 AGPSO00116 658 aa14.5□□□□□ -0.09
MSH5-204ENST00000375755 ZMYND10O75800 440 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms