RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 PLA2G6O60733 806 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 PPFIA3O75145 1194 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 CETPP11597 493 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 SMARCA1P28370 1054 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 TREML2Q5T2D2 321 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 BTNL9Q6UXG8 535 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 SPRYD3Q8NCJ5 442 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 FEM1BQ9UK73 627 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 CCL15-CCL14A0A0B4J2E2 113 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 FAM155AB1AL88 458 aaPredicted RBP14.86□□□□□ -0.03
GJB1-202ENST00000374022 CCL15Q16663 113 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 SYDE2Q5VT97 1194 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 PAXIP1Q6ZW49 1069 aaPredicted RBP14.86□□□□□ -0.03
GJB1-202ENST00000374022 FAM160B2Q86V87 743 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 SMARCC2Q8TAQ2 1214 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 CHURC1Q8WUH1 139 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 SLC26A6Q9BXS9 759 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 RNF26Q9BY78 433 aaPredicted RBP14.86□□□□□ -0.03
GJB1-202ENST00000374022 RIOX1Q9H6W3 641 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 FBXO28Q9NVF7 368 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 AGTPBP1Q9UPW5 1226 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 SMC3Q9UQE7 1217 aa14.86□□□□□ -0.03
GJB1-202ENST00000374022 STK36Q9NRP7 1315 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 RASSF10A6NK89 507 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L15C9J2P7 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L13C9JLJ4 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L11C9JVI0 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L18D6R9N7 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L22D6RA61 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L17D6RBQ6 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L19D6RCP7 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L20D6RJB6 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 FLOT1O75955 427 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 FMNL1O95466 1100 aaPredicted RBP14.85□□□□□ -0.03
GJB1-202ENST00000374022 HMGN5P82970 282 aaKnown RBP14.85□□□□□ -0.03
GJB1-202ENST00000374022 SSRP1Q08945 709 aaKnown RBP14.85□□□□□ -0.03
GJB1-202ENST00000374022 USP17L24Q0WX57 530 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 TRIM22Q8IYM9 498 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 ADGRF4Q8IZF3 695 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 DDX11Q96FC9 970 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 SLF1Q9BQI6 1058 aa14.85□□□□□ -0.03
GJB1-202ENST00000374022 GSE1Q14687 1217 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 CYP4F22Q6NT55 531 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 GPAT2Q6NUI2 795 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 CATSPERGQ6ZRH7 1159 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 BRI3BPQ8WY22 251 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 KIFC2Q96AC6 838 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 VAT1LQ9HCJ6 419 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 ORC3Q9UBD5 711 aaPredicted RBP14.84□□□□□ -0.03
GJB1-202ENST00000374022 PRR12Q9ULL5 1215 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 MANSC4A6NHS7 340 aaPredicted RBP14.84□□□□□ -0.03
GJB1-202ENST00000374022 PRPF3O43395 683 aaKnown RBP14.84□□□□□ -0.03
GJB1-202ENST00000374022 HOXA7P31268 230 aaPredicted RBP14.84□□□□□ -0.03
GJB1-202ENST00000374022 AKAP17AQ02040 695 aaKnown RBP14.84□□□□□ -0.03
GJB1-202ENST00000374022 DEFB115Q30KQ5 88 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
GJB1-202ENST00000374022 PIBF1Q8WXW3 757 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 JMJD4Q9H9V9 463 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 RBM27Q9P2N5 1060 aaKnown RBP14.84□□□□□ -0.03
GJB1-202ENST00000374022 PPP1R9AQ9ULJ8 1098 aa14.84□□□□□ -0.03
GJB1-202ENST00000374022 V9GY48 417 aaPredicted RBP14.84□□□□□ -0.03
GJB1-202ENST00000374022 hCG_1642624A0A1W2PR95 340 aa14.83□□□□□ -0.04
GJB1-202ENST00000374022 FDPSP14324 419 aaKnown RBP14.83□□□□□ -0.04
GJB1-202ENST00000374022 GJB2P29033 226 aa14.83□□□□□ -0.04
GJB1-202ENST00000374022 GRM1Q13255 1194 aa14.83□□□□□ -0.04
GJB1-202ENST00000374022 PABPC4Q13310 644 aaKnown RBP eCLIP14.83□□□□□ -0.04
GJB1-202ENST00000374022 HOMER1Q86YM7 354 aa14.83□□□□□ -0.04
GJB1-202ENST00000374022 PRPF38AQ8NAV1 312 aaKnown RBP14.83□□□□□ -0.04
GJB1-202ENST00000374022 MTMR8Q96EF0 704 aa14.83□□□□□ -0.04
GJB1-202ENST00000374022 RRP36Q96EU6 259 aaKnown RBP14.83□□□□□ -0.04
GJB1-202ENST00000374022 PIGSQ96S52 555 aa14.83□□□□□ -0.04
GJB1-202ENST00000374022 TESPA1A2RU30 521 aaPredicted RBP14.82□□□□□ -0.04
GJB1-202ENST00000374022 BTBD19C9JJ37 291 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 DEXIO95424 95 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 IRX3P78415 501 aaPredicted RBP14.82□□□□□ -0.04
GJB1-202ENST00000374022 COG2Q14746 738 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 SEC63Q9UGP8 760 aaKnown RBP14.82□□□□□ -0.04
GJB1-202ENST00000374022 RBBP6Q7Z6E9 1792 aaKnown RBP14.82□□□□□ -0.04
GJB1-202ENST00000374022 MYPNQ86TC9 1320 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 DSG3P32926 999 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 CDC37Q16543 378 aaPredicted RBP14.82□□□□□ -0.04
GJB1-202ENST00000374022 ANKRD23Q86SG2 305 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 FAM43AQ8N2R8 423 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 FAM184AQ8NB25 1140 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 ATG4CQ96DT6 458 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 CAPNS2Q96L46 248 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
GJB1-202ENST00000374022 RANBP17Q9H2T7 1088 aaKnown RBP14.82□□□□□ -0.04
GJB1-202ENST00000374022 SLC45A1Q9Y2W3 748 aa14.82□□□□□ -0.04
GJB1-202ENST00000374022 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
GJB1-202ENST00000374022 ZBTB5O15062 677 aa14.81□□□□□ -0.04
GJB1-202ENST00000374022 OSBPP22059 807 aa14.81□□□□□ -0.04
GJB1-202ENST00000374022 SNAP25P60880 206 aa14.81□□□□□ -0.04
GJB1-202ENST00000374022 PKN1Q16512 942 aa14.81□□□□□ -0.04
GJB1-202ENST00000374022 PTPN18Q99952 460 aa14.81□□□□□ -0.04
GJB1-202ENST00000374022 PNMA3Q9UL41 463 aa14.81□□□□□ -0.04
GJB1-202ENST00000374022 KIF3AQ9Y496 699 aa14.81□□□□□ -0.04
GJB1-202ENST00000374022 THSD7BQ9C0I4 1608 aa14.81□□□□□ -0.04
GJB1-202ENST00000374022 PNMA6FA0A0J9YX94 578 aa14.8□□□□□ -0.04
GJB1-202ENST00000374022 PDHXO00330 501 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms