RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 WDR19Q8NEZ3 1342 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 ADCY3O60266 1144 aa21.47■■□□□ 1.03
PBX3-205ENST00000373492 CCDC96Q2M329 555 aa21.47■■□□□ 1.03
PBX3-205ENST00000373492 SAMD1Q6SPF0 538 aaPredicted RBP21.47■■□□□ 1.03
PBX3-205ENST00000373492 DHX32Q7L7V1 743 aaKnown RBP21.47■■□□□ 1.03
PBX3-205ENST00000373492 GPR142Q7Z601 462 aa21.47■■□□□ 1.03
PBX3-205ENST00000373492 PLEKHH3Q7Z736 793 aa21.47■■□□□ 1.03
PBX3-205ENST00000373492 SH3TC2Q8TF17 1288 aa21.47■■□□□ 1.03
PBX3-205ENST00000373492 SOCS4Q8WXH5 440 aa21.47■■□□□ 1.03
PBX3-205ENST00000373492 ATG4CQ96DT6 458 aa21.47■■□□□ 1.03
PBX3-205ENST00000373492 JAKMIP1Q96N16 626 aaKnown RBP21.47■■□□□ 1.03
PBX3-205ENST00000373492 CENPFP49454 3210 aa21.47■■□□□ 1.03
PBX3-205ENST00000373492 SEC24BO95487 1268 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 SOX10P56693 466 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 IKQ13123 557 aaPredicted RBP21.46■■□□□ 1.03
PBX3-205ENST00000373492 BLOC1S2Q6QNY1 142 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 TMTC2Q8N394 836 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 IGDCC4Q8TDY8 1250 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 CHURC1Q8WUH1 139 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 CHMP4CQ96CF2 233 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 NUDT12Q9BQG2 462 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 SLF1Q9BQI6 1058 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 SPATC1LQ9H0A9 340 aa21.46■■□□□ 1.03
PBX3-205ENST00000373492 CWC22Q9HCG8 908 aaKnown RBP21.46■■□□□ 1.03
PBX3-205ENST00000373492 TMEM232C9JQI7 657 aa21.45■■□□□ 1.02
PBX3-205ENST00000373492 PDHBP11177 359 aa21.45■■□□□ 1.02
PBX3-205ENST00000373492 STAT2P52630 851 aa21.45■■□□□ 1.02
PBX3-205ENST00000373492 FAM160B2Q86V87 743 aa21.45■■□□□ 1.02
PBX3-205ENST00000373492 PRPF38AQ8NAV1 312 aaKnown RBP21.45■■□□□ 1.02
PBX3-205ENST00000373492 SHCBP1Q8NEM2 672 aa21.45■■□□□ 1.02
PBX3-205ENST00000373492 TMEM106CQ9BVX2 250 aa21.45■■□□□ 1.02
PBX3-205ENST00000373492 FBXO28Q9NVF7 368 aa21.45■■□□□ 1.02
PBX3-205ENST00000373492 SMCHD1A6NHR9 2005 aa21.45■■□□□ 1.02
PBX3-205ENST00000373492 BAZ2BQ9UIF8 2168 aaKnown RBP21.44■■□□□ 1.02
PBX3-205ENST00000373492 VWA5AO00534 786 aa21.44■■□□□ 1.02
PBX3-205ENST00000373492 XRCC5P13010 732 aaKnown RBP21.44■■□□□ 1.02
PBX3-205ENST00000373492 CASTP20810 708 aaKnown RBP21.44■■□□□ 1.02
PBX3-205ENST00000373492 LIFRP42702 1097 aa21.44■■□□□ 1.02
PBX3-205ENST00000373492 UBXN2AP68543 259 aa21.44■■□□□ 1.02
PBX3-205ENST00000373492 MORN1Q5T089 497 aa21.44■■□□□ 1.02
PBX3-205ENST00000373492 NFXL1Q6ZNB6 911 aa21.44■■□□□ 1.02
PBX3-205ENST00000373492 KCTD1Q719H9 257 aa21.44■■□□□ 1.02
PBX3-205ENST00000373492 MOV10L1Q9BXT6 1211 aaKnown RBP21.44■■□□□ 1.02
PBX3-205ENST00000373492 CCDC69A6NI79 296 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 SH2B2O14492 632 aaPredicted RBP21.43■■□□□ 1.02
PBX3-205ENST00000373492 ANAPC15P60006 121 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 FGD1P98174 961 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 EXOSC10Q01780 885 aaKnown RBP21.43■■□□□ 1.02
PBX3-205ENST00000373492 TMEM132BQ14DG7 1078 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 GPATCH4Q5T3I0 446 aaKnown RBP21.43■■□□□ 1.02
PBX3-205ENST00000373492 CATIPQ7Z7H3 387 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 USP6NLQ92738 828 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 KIFC2Q96AC6 838 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 LY9Q9HBG7 655 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 BIN2Q9UBW5 565 aaPredicted RBP21.43■■□□□ 1.02
PBX3-205ENST00000373492 CTDP1Q9Y5B0 961 aaPredicted RBP21.43■■□□□ 1.02
PBX3-205ENST00000373492 PLXNA1Q9UIW2 1896 aa21.43■■□□□ 1.02
PBX3-205ENST00000373492 SLC15A5A6NIM6 579 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 PLA2G6O60733 806 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 SLC25A27O95847 323 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 SNHG28P0DPA3 235 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 PTPREP23469 700 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 RGS2P41220 211 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 WDR78Q5VTH9 848 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 FRMPD2Q68DX3 1309 aaPredicted RBP21.42■■□□□ 1.02
PBX3-205ENST00000373492 RASGRP2Q7LDG7 609 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 LRRC2Q9BYS8 371 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 TM6SF1Q9BZW5 370 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 MROH8Q9H579 483 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 UPF2Q9HAU5 1272 aaKnown RBP21.42■■□□□ 1.02
PBX3-205ENST00000373492 IVNS1ABPQ9Y6Y0 642 aa21.42■■□□□ 1.02
PBX3-205ENST00000373492 STRNO43815 780 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 PARP1P09874 1014 aaKnown RBP21.41■■□□□ 1.02
PBX3-205ENST00000373492 FDX1P10109 184 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 ELNP15502 786 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 ERCC3P19447 782 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 RPS6KB1P23443 525 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 ZNF543Q08ER8 600 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 COL9A3Q14050 684 aaPredicted RBP21.41■■□□□ 1.02
PBX3-205ENST00000373492 PLS1Q14651 629 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 ASPRV1Q53RT3 343 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 RUFY3Q7L099 469 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 TRMT44Q8IYL2 757 aaKnown RBP21.41■■□□□ 1.02
PBX3-205ENST00000373492 REPS2Q8NFH8 660 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 TCEANC2Q96MN5 208 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 GPCPD1Q9NPB8 672 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 CYP46A1Q9Y6A2 500 aa21.41■■□□□ 1.02
PBX3-205ENST00000373492 ZBED4O75132 1171 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 INHAP05111 366 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 CPA1P15085 419 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 CYP2B6P20813 491 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 COPB2P35606 906 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 STAT3P40763 770 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 MAP2K5Q13163 448 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 GRB14Q14449 540 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 SYNE3Q6ZMZ3 975 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 RIOX2Q8IUF8 465 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 ZNF654Q8IZM8 581 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 SENP2Q9HC62 589 aa21.4■■□□□ 1.02
PBX3-205ENST00000373492 KIAA0100Q14667 2235 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms