RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 FOXN1O15353 648 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 CDC27P30260 824 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 SLC35F6Q8N357 371 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 VGLL2Q8N8G2 317 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 ZNF512BQ96KM6 892 aaPredicted RBP12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 SLC26A6Q9BXS9 759 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 PNPLA7Q6ZV29 1317 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 FBXO33Q7Z6M2 555 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 ZNF274Q96GC6 653 aaPredicted RBP12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 TUBE1Q9UJT0 475 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 AKR1B15C9JRZ8 316 aaPredicted RBP12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 CCDC125Q86Z20 511 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 JMYQ8N9B5 988 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 HOOK1Q9UJC3 728 aaKnown RBP12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 MYH15Q9Y2K3 1946 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 ERLIN2O94905 339 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 EXOSC10Q01780 885 aaKnown RBP12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 SSRP1Q08945 709 aaKnown RBP12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 RTN1Q16799 776 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 AOC3Q16853 763 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 TICAM2Q86XR7 235 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 RIN2Q8WYP3 895 aaPredicted RBP12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 AIFM3Q96NN9 605 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 MYL10Q9BUA6 226 aa12.57□□□□□ -0.4
RPRD1B-201ENST00000373433 KLHL10Q6JEL2 608 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 WASF1Q92558 559 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 TMEM87BQ96K49 555 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 RAB21Q9UL25 225 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 CYP2D7A0A087X1C5 515 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 CCT5P48643 541 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 SHC4Q6S5L8 630 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 RAD9BQ6WBX8 426 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 METTL16Q86W50 562 aaKnown RBP12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 NOA1Q8NC60 698 aaKnown RBP12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 MED4Q9NPJ6 270 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 SAMSN1Q9NSI8 373 aaKnown RBP12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 ATP8A2Q9NTI2 1148 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 TBX2Q13207 712 aaPredicted RBP12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 SLC39A14Q15043 492 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 SOGA3Q5TF21 947 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 ADGRG1Q9Y653 693 aa12.56□□□□□ -0.4
RPRD1B-201ENST00000373433 A0A087WUV0 522 aaPredicted RBP12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 DLGAP5Q15398 846 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 CCDC96Q2M329 555 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 NCAPH2Q6IBW4 605 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 ARHGAP27Q6ZUM4 889 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 PODNQ7Z5L7 613 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 ARPP21Q9UBL0 812 aaPredicted RBP12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 KIF5BP33176 963 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 ANKRD20A12PQ8NF67 263 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 CABP5Q9NP86 173 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 POLLQ9UGP5 575 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 KCNH3Q9ULD8 1083 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 IGSF22Q8N9C0 903 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 ACRBPQ8NEB7 543 aa12.55□□□□□ -0.4
RPRD1B-201ENST00000373433 ITGB4P16144 1822 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 MAP2K2P36507 400 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 TFAP4Q01664 338 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 NAPGQ99747 312 aaPredicted RBP12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 USP17L3A6NCW0 530 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 USP17L4A6NCW7 530 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 TEX33O43247 280 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 ZMYND10O75800 440 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 DPEP1P16444 411 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 STX17P56962 302 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 TTLL12Q14166 644 aaPredicted RBP12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 FBXW10Q5XX13 1052 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 USP17L1Q7RTZ2 530 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 NSUN4Q96CB9 384 aaKnown RBP12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 CRACR2AQ9BSW2 395 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 ECE2O60344 883 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 BMP6P22004 513 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 RBL2Q08999 1139 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
RPRD1B-201ENST00000373433 EBAG9O00559 213 aa12.53□□□□□ -0.4
RPRD1B-201ENST00000373433 USP17L8P0C7I0 530 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms