RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 RFX1P22670 979 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 ZNF589Q86UQ0 364 aaPredicted RBP16.33■□□□□ 0.2
NDC1-201ENST00000371429 CCDC25Q86WR0 208 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 OSBP2Q969R2 916 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 FAM107BQ9H098 131 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 AP5M1Q9H0R1 490 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 GAS8O95995 478 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 UBXN2AP68543 259 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 RNF187Q5TA31 235 aaPredicted RBP16.33■□□□□ 0.2
NDC1-201ENST00000371429 CTTNBP2NLQ9P2B4 639 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 PALM3A6NDB9 673 aaPredicted RBP16.33■□□□□ 0.2
NDC1-201ENST00000371429 YARSP54577 528 aaKnown RBP16.33■□□□□ 0.2
NDC1-201ENST00000371429 MKRN3Q13064 507 aaKnown RBP16.33■□□□□ 0.2
NDC1-201ENST00000371429 TBC1D9BQ66K14 1250 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 CYP26C1Q6V0L0 522 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 DYNLL2Q96FJ2 89 aa16.33■□□□□ 0.2
NDC1-201ENST00000371429 LRRIQ4A6NIV6 560 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 K7ENM7 598 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 NDC80O14777 642 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 PFKFB1P16118 471 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 STAT2P52630 851 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 TRMT44Q8IYL2 757 aaKnown RBP16.32■□□□□ 0.2
NDC1-201ENST00000371429 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 RNF26Q9BY78 433 aaPredicted RBP16.32■□□□□ 0.2
NDC1-201ENST00000371429 RTEL1Q9NZ71 1219 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 COL4A3BPQ9Y5P4 624 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 BRD1O95696 1058 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 YWHAEP62258 255 aaKnown RBP16.32■□□□□ 0.2
NDC1-201ENST00000371429 MICALCLQ6ZW33 695 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 CARMIL3Q8ND23 1372 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 PTGDRQ13258 359 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 PNOCQ13519 176 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 ARHGAP44Q17R89 818 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 LRCH2Q5VUJ6 765 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 FBXO18Q8NFZ0 1043 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 NAP1L3Q99457 506 aaPredicted RBP16.32■□□□□ 0.2
NDC1-201ENST00000371429 FAM204AQ9H8W3 233 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 GADD45BO75293 160 aaPredicted RBP16.32■□□□□ 0.2
NDC1-201ENST00000371429 SASH1O94885 1247 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 SLU7O95391 586 aaKnown RBP16.32■□□□□ 0.2
NDC1-201ENST00000371429 XRCC5P13010 732 aaKnown RBP16.32■□□□□ 0.2
NDC1-201ENST00000371429 SYT10Q6XYQ8 523 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 PODNQ7Z5L7 613 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 RASEFQ8IZ41 740 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 IFT81Q8WYA0 676 aa16.32■□□□□ 0.2
NDC1-201ENST00000371429 GNA14O95837 355 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 VAV2P52735 878 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 MCM6Q14566 821 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 FAM193BQ96PV7 902 aaPredicted RBP16.31■□□□□ 0.2
NDC1-201ENST00000371429 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
NDC1-201ENST00000371429 ADCK5Q3MIX3 580 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 ATP6V0A1Q93050 837 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 MINPP1Q9UNW1 487 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 LRMPQ12912 555 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 CRB1P82279 1406 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 E7EVH7 732 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 IGKV5-2P06315 115 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 ERCC5P28715 1186 aaPredicted RBP16.31■□□□□ 0.2
NDC1-201ENST00000371429 DMP1Q13316 513 aaPredicted RBP16.31■□□□□ 0.2
NDC1-201ENST00000371429 JAKMIP2Q96AA8 810 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 STMN4Q9H169 189 aaPredicted RBP16.31■□□□□ 0.2
NDC1-201ENST00000371429 CBX8Q9HC52 389 aa16.31■□□□□ 0.2
NDC1-201ENST00000371429 CYP2D7A0A087X1C5 515 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 CBX1P83916 185 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 SCRN1Q12765 414 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 RASA3Q14644 834 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 TBC1D10BQ4KMP7 808 aaPredicted RBP16.3■□□□□ 0.2
NDC1-201ENST00000371429 GPIHBP1Q8IV16 184 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 HSPA1LP34931 641 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 MAGEA1P43355 309 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 ST7Q9NRC1 585 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 FAM207AQ9NSI2 230 aaPredicted RBP16.3■□□□□ 0.2
NDC1-201ENST00000371429 MYO3BQ8WXR4 1341 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 ASNSP08243 561 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 ZNF577Q9BSK1 485 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 ANO3Q9BYT9 981 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 PANK4Q9NVE7 773 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 TUBB4BP68371 445 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 UBL4BQ8N7F7 174 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 CELF1Q92879 486 aaKnown RBP16.3■□□□□ 0.2
NDC1-201ENST00000371429 PIGSQ96S52 555 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 NLRC4Q9NPP4 1024 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 USTQ9Y2C2 406 aa16.3■□□□□ 0.2
NDC1-201ENST00000371429 TNNC2P02585 160 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 CACNB3P54284 484 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 RABGAP1Q9Y3P9 1069 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 SYDE2Q5VT97 1194 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.29■□□□□ 0.2
NDC1-201ENST00000371429 SYNE4Q8N205 404 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 ARMCX3Q9UH62 379 aaPredicted RBP16.29■□□□□ 0.2
NDC1-201ENST00000371429 ZHX1Q9UKY1 873 aaPredicted RBP16.29■□□□□ 0.2
NDC1-201ENST00000371429 ALKQ9UM73 1620 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 CCDC26Q8TAB7 109 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 SLC7A3Q8WY07 619 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms