RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 HSPD1P10809 573 aaKnown RBP24.38■■□□□ 1.49
TM9SF3-201ENST00000371142 MIPOL1Q8TD10 442 aa24.38■■□□□ 1.49
TM9SF3-201ENST00000371142 USP21Q9UK80 565 aa24.38■■□□□ 1.49
TM9SF3-201ENST00000371142 PDE6AP16499 860 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 VPS41P49754 854 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 LRRC24Q50LG9 513 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 ADAT2Q7Z6V5 191 aaKnown RBP24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 STAM2O75886 525 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 CAPN12Q6ZSI9 719 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 ARHGAP24Q8N264 748 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 CCDC51Q96ER9 411 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 POLR2MP0CAP2 368 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 STX2P32856 288 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 EAF2Q96CJ1 260 aaPredicted RBP24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 SLC39A2Q9NP94 309 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 ANKRD20A3Q5VUR7 823 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 PALD1Q9ULE6 856 aa24.37■■□□□ 1.49
TM9SF3-201ENST00000371142 ERVV-2B6SEH9 535 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 OR52Z1P0C646 297 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 KMT5BQ4FZB7 885 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 TRIM58Q8NG06 486 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 AS3MTQ9HBK9 375 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 HAUS2Q9NVX0 235 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 KLRF2D3W0D1 207 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 CCDC170Q8IYT3 715 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 H7C1D1 291 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 ABL1P00519 1130 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 ADCY8P40145 1251 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 SARNPP82979 210 aaKnown RBP24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 IQCDQ96DY2 449 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 IWS1Q96ST2 819 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 CSADQ9Y600 493 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 MAST1Q9Y2H9 1570 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 TTC36A6NLP5 189 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 POLR2FP61218 127 aaKnown RBP24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 NEK8Q86SG6 692 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 HACE1Q8IYU2 909 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 ATP2A3Q93084 1043 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 STK38LQ9Y2H1 464 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 PFKFB2O60825 505 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 BTDP43251 543 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 IFRD2Q12894 506 aaPredicted RBP24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 BIRC2Q13490 618 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 USP44Q9H0E7 712 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 SEPT10Q9P0V9 454 aa24.36■■□□□ 1.49
TM9SF3-201ENST00000371142 DLATP10515 647 aaKnown RBP24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 KIAA0825Q8IV33 1275 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 UBE2Q2Q8WVN8 375 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 ATF7P17544 494 aaPredicted RBP24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 TSNAXIP1Q2TAA8 658 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 CERKLQ49MI3 558 aaPredicted RBP24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 SMAP1Q8IYB5 467 aaPredicted RBP24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 TAB3Q8N5C8 712 aaPredicted RBP24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 CEP120Q8N960 986 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 ARHGAP25P42331 645 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 CLNS1AP54105 237 aaKnown RBP24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 TRIM50Q86XT4 487 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 KSR1Q8IVT5 923 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 SLFN12Q8IYM2 578 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 DPH5Q9H2P9 285 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 SCG2P13521 617 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 ZBTB8OSQ8IWT0 167 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 ARMCX3Q9UH62 379 aaPredicted RBP24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 BICRAQ9NZM4 1560 aa24.35■■□□□ 1.49
TM9SF3-201ENST00000371142 CCDC13Q8IYE1 715 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 P3H4Q92791 437 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 KIAA0556O60303 1618 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 A0A1B0GUA9 196 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 TNNC2P02585 160 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 FBXO11Q86XK2 927 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 C1orf112Q9NSG2 853 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 HYOU1Q9Y4L1 999 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 CLIC4Q9Y696 253 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 CAPN9O14815 690 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 COBLO75128 1261 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 PDE6CP51160 858 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 KCNG1Q9UIX4 513 aa24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 MRPL11Q9Y3B7 192 aaKnown RBP24.34■■□□□ 1.49
TM9SF3-201ENST00000371142 WHAMMP3Q1A5X7 153 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 TMCO4Q5TGY1 634 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 SESTD1Q86VW0 696 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 RPN1P04843 607 aaKnown RBP24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 GADL1Q6ZQY3 521 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 SUGCTQ9HAC7 445 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 BTBD18B2RXH4 712 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 FAM178BQ8IXR5 827 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 ZBTB38Q8NAP3 1195 aaPredicted RBP24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 PPP2R2CQ9Y2T4 447 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 FGAP02671 866 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 SSH3Q8TE77 659 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 VCXQ9H320 206 aa24.33■■□□□ 1.49
TM9SF3-201ENST00000371142 ITKQ08881 620 aa24.33■■□□□ 1.48
TM9SF3-201ENST00000371142 ADCY9O60503 1353 aa24.32■■□□□ 1.48
TM9SF3-201ENST00000371142 LPXNO60711 386 aa24.32■■□□□ 1.48
TM9SF3-201ENST00000371142 CHRNDQ07001 517 aa24.32■■□□□ 1.48
TM9SF3-201ENST00000371142 POLA2Q14181 598 aa24.32■■□□□ 1.48
TM9SF3-201ENST00000371142 TEKT3Q9BXF9 490 aa24.32■■□□□ 1.48
TM9SF3-201ENST00000371142 ZSWIM6Q9HCJ5 1215 aa24.32■■□□□ 1.48
TM9SF3-201ENST00000371142 FANCLQ9NW38 375 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms