RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 IPO5O00410 1097 aaKnown RBP4.59□□□□□ -1.67
MCF2-203ENST00000370576 GYS1P13807 737 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 STT3AP46977 705 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 PRSS12P56730 875 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 LMNB2Q03252 620 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 GCKRQ14397 625 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 E2F5Q15329 346 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 MICALL1Q8N3F8 863 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 CCDC191Q8NCU4 936 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 ZFPM2Q8WW38 1151 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 CRELD1Q96HD1 420 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 SRCIN1Q9C0H9 1055 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 OBP2AQ9NY56 170 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 MYH1P12882 1939 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 ALG1L2C9J202 215 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 PCCAP05165 728 aaPredicted RBP4.59□□□□□ -1.67
MCF2-203ENST00000370576 TNFAIP3P21580 790 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 HOXA10P31260 410 aaPredicted RBP4.59□□□□□ -1.67
MCF2-203ENST00000370576 MAP3K10Q02779 954 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 PIN1Q13526 163 aaPredicted RBP4.59□□□□□ -1.67
MCF2-203ENST00000370576 SPECC1Q5M775 1068 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 ATG9AQ7Z3C6 839 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 DNAAF4Q8WXU2 420 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 GPRASP2Q96D09 838 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 GMCL1Q96IK5 515 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 KIAA1024Q9UPX6 916 aa4.59□□□□□ -1.67
MCF2-203ENST00000370576 SH3TC1Q8TE82 1336 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 RLFQ13129 1914 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 HMMRO75330 724 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 TPPPO94811 219 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 CAMTA2O94983 1202 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 CYP2E1P05181 493 aaPredicted RBP4.59□□□□□ -1.68
MCF2-203ENST00000370576 TNNT2P45379 298 aaPredicted RBP4.59□□□□□ -1.68
MCF2-203ENST00000370576 NEK2P51955 445 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 DPYDQ12882 1025 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 ZCCHC8Q6NZY4 707 aaKnown RBP4.59□□□□□ -1.68
MCF2-203ENST00000370576 CKAP2LQ8IYA6 745 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 CHCHD4Q8N4Q1 142 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 POLR3CQ9BUI4 534 aaPredicted RBP4.59□□□□□ -1.68
MCF2-203ENST00000370576 ABCG4Q9H172 646 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 COMMD8Q9NX08 183 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 PCDHGB3Q9Y5G1 929 aa4.59□□□□□ -1.68
MCF2-203ENST00000370576 MORC2Q9Y6X9 1032 aaPredicted RBP4.59□□□□□ -1.68
MCF2-203ENST00000370576 RAD50Q92878 1312 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 IQCA1LA6NCM1 817 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 OAS2P29728 719 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 L1TD1Q5T7N2 865 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 KIAA0825Q8IV33 1275 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 GLYCTKQ8IVS8 523 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 WDR75Q8IWA0 830 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 FAM43AQ8N2R8 423 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 SRPK1Q96SB4 655 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 MEIS3Q99687 375 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 TPCN1Q9ULQ1 816 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 GPR52Q9Y2T5 361 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 MYH6P13533 1939 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 SCN9AQ15858 1988 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 SFTPCP11686 197 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 FOSL1P15407 271 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 TOMM20Q15388 145 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 DDB1Q16531 1140 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 KLHL10Q6JEL2 608 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 UNC5DQ6UXZ4 953 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 MMS22LQ6ZRQ5 1243 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 STK11IPQ8N1F8 1099 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 ZNF713Q8N859 430 aaPredicted RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 RSAD2Q8WXG1 361 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 ANP32BQ92688 251 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 CEP95Q96GE4 821 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 TBATAQ96M53 351 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 TSGA13Q96PP4 275 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 HAUS7Q99871 368 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 CENPOQ9BU64 300 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 AGXT2Q9BYV1 514 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 PHAXQ9H814 394 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 BCL2L12Q9HB09 334 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 FBXO2Q9UK22 296 aaPredicted RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 LUC7L2Q9Y383 392 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 ATP5J2-PTCD1G3V325 749 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 K7ENM7 598 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 RASGRP1O95267 797 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 EVCP57679 992 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 RAC1P63000 192 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 GPATCH4Q5T3I0 446 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 C1orf53Q5VUE5 145 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 TTLL5Q6EMB2 1281 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 TATDN1Q6P1N9 297 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 ANKS3Q6ZW76 656 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 RASGRP2Q7LDG7 609 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 SMAP1Q8IYB5 467 aaPredicted RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 USHBP1Q8N6Y0 703 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 SPAG5Q96R06 1193 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 TRIM8Q9BZR9 551 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 PDP2Q9P2J9 529 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 CEP131Q9UPN4 1083 aa4.58□□□□□ -1.68
MCF2-203ENST00000370576 PA2G4Q9UQ80 394 aaKnown RBP4.58□□□□□ -1.68
MCF2-203ENST00000370576 AREL1O15033 823 aa4.57□□□□□ -1.68
MCF2-203ENST00000370576 PLSCR1O15162 318 aa4.57□□□□□ -1.68
MCF2-203ENST00000370576 RFPL3O75679 317 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms