RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 LRRC2Q9BYS8 371 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 SPATC1LQ9H0A9 340 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 PORCNQ9H237 461 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 LY9Q9HBG7 655 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 WDR19Q8NEZ3 1342 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 CCDC69A6NI79 296 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 PLA2G6O60733 806 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 PARP1P09874 1014 aaKnown RBP17.34■□□□□ 0.37
COL9A1-204ENST00000370496 GOLGA8HP0CJ92 632 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 PSMA5P28066 241 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 FGD1P98174 961 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 COL9A3Q14050 684 aaPredicted RBP17.34■□□□□ 0.37
COL9A1-204ENST00000370496 TMEM132BQ14DG7 1078 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 PKN2Q16513 984 aaKnown RBP17.34■□□□□ 0.37
COL9A1-204ENST00000370496 C8orf34Q49A92 452 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 MCOLN1Q9GZU1 580 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 SENP2Q9HC62 589 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 ZNF236Q9UL36 1845 aa17.34■□□□□ 0.37
COL9A1-204ENST00000370496 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
COL9A1-204ENST00000370496 SLC16A2P36021 539 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 PRKCZQ05513 592 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 Q3C1V9 767 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 SYDE2Q5VT97 1194 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 SNRNP48Q6IEG0 339 aaKnown RBP17.33■□□□□ 0.36
COL9A1-204ENST00000370496 TTBK2Q6IQ55 1244 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 DHX32Q7L7V1 743 aaKnown RBP17.33■□□□□ 0.36
COL9A1-204ENST00000370496 TNS4Q8IZW8 715 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 IGDCC4Q8TDY8 1250 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 TCEANC2Q96MN5 208 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 MOV10L1Q9BXT6 1211 aaKnown RBP17.33■□□□□ 0.36
COL9A1-204ENST00000370496 TEX13BQ9BXU2 312 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 GPHNQ9NQX3 736 aaPredicted RBP17.33■□□□□ 0.36
COL9A1-204ENST00000370496 PRR12Q9ULL5 1215 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 ADAMTS5Q9UNA0 930 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 IVNS1ABPQ9Y6Y0 642 aa17.33■□□□□ 0.36
COL9A1-204ENST00000370496 DHX16O60231 1041 aaKnown RBP17.32■□□□□ 0.36
COL9A1-204ENST00000370496 DDAH1O94760 285 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 FDX1P10109 184 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 PRMT2P55345 433 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 FBXO46Q6PJ61 603 aaPredicted RBP17.32■□□□□ 0.36
COL9A1-204ENST00000370496 GPR142Q7Z601 462 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 NCAPG2Q86XI2 1143 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 ZNF654Q8IZM8 581 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 CPXCR1Q8N123 301 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 TMTC2Q8N394 836 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 REPS2Q8NFH8 660 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 NUP133Q8WUM0 1156 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
COL9A1-204ENST00000370496 ZNF214Q9UL59 606 aaPredicted RBP17.32■□□□□ 0.36
COL9A1-204ENST00000370496 MYH6P13533 1939 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 CPA1P15085 419 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 ERCC3P19447 782 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 COPB2P35606 906 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 STAT3P40763 770 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 SLC4A3P48751 1232 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 CCDC174Q6PII3 467 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 BTNL9Q6UXG8 535 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 PLEKHH3Q7Z736 793 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 RAET1EQ8TD07 263 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 SOCS4Q8WXH5 440 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 MYL10Q9BUA6 226 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 RAVER2Q9HCJ3 691 aaKnown RBP17.31■□□□□ 0.36
COL9A1-204ENST00000370496 PTPN22Q9Y2R2 807 aa17.31■□□□□ 0.36
COL9A1-204ENST00000370496 RBBP6Q7Z6E9 1792 aaKnown RBP17.3■□□□□ 0.36
COL9A1-204ENST00000370496 SLC25A27O95847 323 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 RPS6KB1P23443 525 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 LIFRP42702 1097 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 OAZ1P54368 228 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 GRM4Q14833 912 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 RIOX2Q8IUF8 465 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 CTCFLQ8NI51 663 aaPredicted RBP17.3■□□□□ 0.36
COL9A1-204ENST00000370496 MROH8Q9H579 483 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 SLC12A7Q9Y666 1083 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 PTCH2Q9Y6C5 1203 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 DOCK3Q8IZD9 2030 aa17.3■□□□□ 0.36
COL9A1-204ENST00000370496 SEC24BO95487 1268 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 FLT3LGP49771 235 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 SNAP25P60880 206 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
COL9A1-204ENST00000370496 TROAPQ12815 778 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 SYNE3Q6ZMZ3 975 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 NUDT12Q9BQG2 462 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 RANBP17Q9H2T7 1088 aaKnown RBP17.29■□□□□ 0.36
COL9A1-204ENST00000370496 CPVLQ9H3G5 476 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 NAP1L2Q9ULW6 460 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-204ENST00000370496 GABRQQ9UN88 632 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 CYP46A1Q9Y6A2 500 aa17.29■□□□□ 0.36
COL9A1-204ENST00000370496 ATP2A1O14983 1001 aa17.28■□□□□ 0.36
COL9A1-204ENST00000370496 CALM1P0DP23 149 aa17.28■□□□□ 0.36
COL9A1-204ENST00000370496 CALM2P0DP24 149 aa17.28■□□□□ 0.36
COL9A1-204ENST00000370496 CALM3P0DP25 149 aa17.28■□□□□ 0.36
COL9A1-204ENST00000370496 KIF5BP33176 963 aa17.28■□□□□ 0.36
COL9A1-204ENST00000370496 ANAPC15P60006 121 aa17.28■□□□□ 0.36
COL9A1-204ENST00000370496 Q6ZUG5 572 aa17.28■□□□□ 0.36
COL9A1-204ENST00000370496 SGMS1Q86VZ5 419 aa17.28■□□□□ 0.36
COL9A1-204ENST00000370496 STAG2Q8N3U4 1231 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms