RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 SRRTQ9BXP5 876 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-202ENST00000370399 ATP6V0A2Q9Y487 856 aa8.01□□□□□ -1.13
TGFBR3-202ENST00000370399 SRPRBQ9Y5M8 271 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-202ENST00000370399 PPP1R12BO60237 982 aaPredicted RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 MYCLP12524 364 aaPredicted RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 IBSPP21815 317 aaPredicted RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 EZH2Q15910 746 aaKnown RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 EHMT1Q9H9B1 1298 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 SLC39A2Q9NP94 309 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 ADAMTSL3P82987 1691 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 SYCP1Q15431 976 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 CCDC17Q96LX7 622 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 SAMSN1Q9NSI8 373 aaKnown RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 KIF2AO00139 706 aaPredicted RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 KIF20AO95235 890 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 PFKFB3Q16875 520 aaPredicted RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 FBXO11Q86XK2 927 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 KANSL2Q9H9L4 492 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 FLT1P17948 1338 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L15C9J2P7 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L13C9JLJ4 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L11C9JVI0 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L18D6R9N7 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L22D6RA61 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L17D6RBQ6 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L19D6RCP7 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L20D6RJB6 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 HOXA13P31271 388 aaPredicted RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 CACNB1Q02641 598 aaPredicted RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 DDR1Q08345 913 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L24Q0WX57 530 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 TROAPQ12815 778 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 SKIDA1Q1XH10 827 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 CCDC181Q5TID7 509 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 TTBK2Q6IQ55 1244 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L6PQ6QN14 398 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 GOLGA6L1Q8N7Z2 621 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 CRAMP1Q96RY5 1269 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 TMEM260Q9NX78 707 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 MAN1B1Q9UKM7 699 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 CLEC11AQ9Y240 323 aa8□□□□□ -1.13
TGFBR3-202ENST00000370399 LUC7L2Q9Y383 392 aaKnown RBP8□□□□□ -1.13
TGFBR3-202ENST00000370399 TOPAZ1Q8N9V7 1692 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 ORC4O43929 436 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 ALAS1P13196 640 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 CCDC93Q567U6 631 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 RASGRP2Q7LDG7 609 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 FAM114A1Q8IWE2 563 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 SPAG5Q96R06 1193 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 NOC4LQ9BVI4 516 aaKnown RBP7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 POLD4Q9HCU8 107 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 AKR1B15C9JRZ8 316 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 SORBS3O60504 671 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 SLFN14P0C7P3 912 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 KRT9P35527 623 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 GPATCH4Q5T3I0 446 aaKnown RBP7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 ARHGAP27Q6ZUM4 889 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 DESI2Q9BSY9 194 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 LRRC27Q9C0I9 530 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 ZNF408Q9H9D4 720 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 DDX25Q9UHL0 483 aaKnown RBP7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 GUCA1BQ9UMX6 200 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 RIC1Q4ADV7 1423 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 RGPD2P0DJD1 1756 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 SPDYE4A6NLX3 237 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 USP17L10C9JJH3 530 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 PRR29P0C7W0 189 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 SLURP2P0DP57 97 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 RASA1P20936 1047 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 NFIAQ12857 509 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 ASPRV1Q53RT3 343 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 AMIGO3Q86WK7 504 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 LRRC8AQ8IWT6 810 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 TPH2Q8IWU9 490 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 PRIMPOLQ96LW4 560 aa7.99□□□□□ -1.13
TGFBR3-202ENST00000370399 FAM13AO94988 1023 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 EEF2P13639 858 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 CBX1P83916 185 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 TRAF1Q13077 416 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 DCAF17Q5H9S7 520 aaPredicted RBP7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 NEDD1Q8NHV4 660 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 AGXT2Q9BYV1 514 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 NBPF3Q9H094 633 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 SWAP70Q9UH65 585 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 STK36Q9NRP7 1315 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 RPN1P04843 607 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 CCDC175P0C221 793 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 RESP18Q5W5W9 173 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 LUC7LQ9NQ29 371 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 PICK1Q9NRD5 415 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 BICDL2A1A5D9 508 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 RIOK3O14730 519 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 LRRC41Q15345 812 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 SPECC1LQ69YQ0 1117 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 NBPF11Q86T75 865 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 MRFAP1L1Q96HT8 127 aa7.98□□□□□ -1.13
TGFBR3-202ENST00000370399 AMNQ9BXJ7 453 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms