RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 TBX2Q13207 712 aaPredicted RBP11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 SF3B2Q13435 895 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 POTEDQ86YR6 584 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 EHBP1Q8NDI1 1231 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 PIH1D3Q9NQM4 214 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 SYF2O95926 243 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 MCAMP43121 646 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 RASSF7Q02833 373 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 ADAT2Q7Z6V5 191 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 CDK5RAP3Q96JB5 506 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 MAP3K14Q99558 947 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 PACSIN2Q9UNF0 486 aaPredicted RBP11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 NBPF14Q5TI25 921 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 TMC4Q7Z404 712 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 HNRNPLLQ8WVV9 542 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 SALL1Q9NSC2 1324 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 PIK3C2AO00443 1686 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 PRCPP42785 496 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 PDE4DQ08499 809 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 FAM47AQ5JRC9 791 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 DYMQ7RTS9 669 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 IQCA1Q86XH1 822 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 MSANTD4Q8NCY6 345 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 HPS3Q969F9 1004 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 SEPT11Q9NVA2 429 aaKnown RBP11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 ODF2LQ9ULJ1 636 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 SUFUQ9UMX1 484 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 CLSTN1O94985 981 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 FTCDO95954 541 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 PLEKP08567 350 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 TUBB4BP68371 445 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 TCP11X2Q5H9J9 407 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 RPAINQ86UA6 219 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 ANKLE2Q86XL3 938 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 KAT2BQ92831 832 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 KRT12Q99456 494 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 KRT23Q9C075 422 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 SRPRBQ9Y5M8 271 aaKnown RBP11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 ADAMTS13Q76LX8 1427 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 TNRQ92752 1358 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 A0A087X0B3 334 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 ZSCAN5CA6NGD5 496 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 ZNF18P17022 549 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 EVA1CP58658 441 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 SPTY2D1Q68D10 685 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 SELENOSQ9BQE4 189 aa11.61□□□□□ -0.55
PRPF38B-201ENST00000370021 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 CDHR2Q9BYE9 1310 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 RPN1P04843 607 aaKnown RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 CCNI2Q6ZMN8 369 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 TRIML1Q8N9V2 468 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.554e-9■■■■■ 27.3
PRPF38B-201ENST00000370021 MED15Q96RN5 788 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 TUBGCP2Q9BSJ2 902 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 KANSL2Q9H9L4 492 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 EXOC1Q9NV70 894 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 EZRP15311 586 aaKnown RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 EHHADHQ08426 723 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 KRT28Q7Z3Y7 464 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 OR2W6PQ8NHA6 318 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 CCDC51Q96ER9 411 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 LY9Q9HBG7 655 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 USP31Q70CQ4 1352 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 PDE2AO00408 941 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 SKAP2O75563 359 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 PLEKHA8P1O95397 391 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 CLTAP09496 248 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 SCP2P22307 547 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 TCIRG1Q13488 830 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 THEMISQ8N1K5 641 aaPredicted RBP11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 GREM2Q9H772 168 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 ATG3Q9NT62 314 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 FAM184BQ9ULE4 1060 aa11.6□□□□□ -0.55
PRPF38B-201ENST00000370021 HEXIM1O94992 359 aaKnown RBP11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 USP5P45974 858 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 FOXO4P98177 505 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 DPYDQ12882 1025 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 NAA35Q5VZE5 725 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 HEATR3Q7Z4Q2 680 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 GSDMAQ96QA5 445 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 SLC39A2Q9NP94 309 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 TNKSO95271 1327 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 SMIM22K7EJ46 135 aa11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 EARS2Q5JPH6 523 aaKnown RBP11.59□□□□□ -0.55
PRPF38B-201ENST00000370021 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms