RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 ARL8AQ96BM9 186 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 CAPS2Q9BXY5 557 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 CNNM2Q9H8M5 875 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 RPN1P04843 607 aaKnown RBP13.77□□□□□ -0.2
PHGDH-201ENST00000369407 TUBBP07437 444 aa13.77□□□□□ -0.2
PHGDH-201ENST00000369407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.2
PHGDH-201ENST00000369407 TMEM94Q12767 1356 aa13.77□□□□□ -0.2
PHGDH-201ENST00000369407 CCDC196A0A1B0GTZ2 297 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 PCCAP05165 728 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-201ENST00000369407 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
PHGDH-201ENST00000369407 EVX2Q03828 476 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 PDCLQ13371 301 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 PDXDC2PQ6P474 469 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 MMS22LQ6ZRQ5 1243 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 ZBTB38Q8NAP3 1195 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-201ENST00000369407 MLXIPQ9HAP2 919 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.21
PHGDH-201ENST00000369407 ADAMTS7Q9UKP4 1686 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 TJP1Q07157 1748 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 ZPR1O75312 459 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 MAP3K12Q12852 859 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 PAPD7Q5XG87 772 aaKnown RBP13.77□□□□□ -0.21
PHGDH-201ENST00000369407 ANKRD18AQ8IVF6 992 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 VGLL2Q8N8G2 317 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 TSEN2Q8NCE0 465 aaKnown RBP13.77□□□□□ -0.21
PHGDH-201ENST00000369407 PHF20Q9BVI0 1012 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 LRWD1Q9UFC0 647 aa13.77□□□□□ -0.21
PHGDH-201ENST00000369407 SOS2Q07890 1332 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-201ENST00000369407 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 ZEB2O60315 1214 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 SLC4A8Q2Y0W8 1093 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 NHEJ1Q9H9Q4 299 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-201ENST00000369407 XBP1P17861 261 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 BCAMP50895 628 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 TOM1L2Q6ZVM7 507 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 RASGRP4Q8TDF6 673 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 FERMT2Q96AC1 680 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 WDR17Q8IZU2 1322 aa13.76□□□□□ -0.21
PHGDH-201ENST00000369407 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 NCK2O43639 380 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 KRT86O43790 486 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 HNRNPH1P31943 449 aaKnown RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 SPAG1Q07617 926 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 ALX1Q15699 326 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 ZNF658Q5TYW1 1059 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 STAG1Q8WVM7 1258 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.213e-9■■■□□ 17.8
PHGDH-201ENST00000369407 CAPN6Q9Y6Q1 641 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 GTPBP6O43824 516 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 NMT2O60551 498 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 ECM2O94769 699 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 CTSWP56202 376 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 CKAP4Q07065 602 aaKnown RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 TRIM14Q14142 442 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 NFRKBQ6P4R8 1299 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 TMED8Q6PL24 325 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 ADGRA1Q86SQ6 560 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 ENAHQ8N8S7 591 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 TRMT112Q9UI30 125 aaKnown RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 GRIN2DO15399 1336 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 ABCC12Q96J65 1359 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 MYO1FO00160 1098 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 MOCS3O95396 460 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 KCNV1Q6PIU1 500 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 DNAJC7Q99615 494 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-201ENST00000369407 BRMS1Q9HCU9 246 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 ABCF2Q9UG63 623 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 SUFUQ9UMX1 484 aa13.75□□□□□ -0.21
PHGDH-201ENST00000369407 RASSF10A6NK89 507 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 ZNF263O14978 683 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 SHOX2O60902 331 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-201ENST00000369407 KRT14P02533 472 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 MCM3P25205 808 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 STAT6P42226 847 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 NPY5RQ15761 445 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 TTMPQ5BVD1 217 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 MCTP2Q6DN12 878 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 AENQ8WTP8 325 aaKnown RBP13.74□□□□□ -0.21
PHGDH-201ENST00000369407 LRP2BPQ9P2M1 347 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 CAPN7Q9Y6W3 813 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 PHRF1Q9P1Y6 1649 aaKnown RBP13.74□□□□□ -0.21
PHGDH-201ENST00000369407 AKAP11Q9UKA4 1901 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 ESYT3A0FGR9 886 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 TARSL2A2RTX5 802 aaKnown RBP13.74□□□□□ -0.21
PHGDH-201ENST00000369407 IPO7O95373 1038 aaKnown RBP13.74□□□□□ -0.21
PHGDH-201ENST00000369407 INPP5BP32019 993 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 MAP2K2P36507 400 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 NLRP5P59047 1200 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 ATP2C1P98194 919 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms