RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, human

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-204	ENST00000368640	EVC	P57679	992 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	IRX3	P78415	501 aa	Predicted RBP	13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	APOBR	Q0VD83	1088 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	USP17L24	Q0WX57	530 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	CCL15	Q16663	113 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	RTN1	Q16799	776 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	MICU3	Q86XE3	530 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	RASAL3	Q86YV0	1011 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	TANGO6	Q9C0B7	1094 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	AGTPBP1	Q9UPW5	1226 aa		13.66	□□□□□ -0.22
LAMA4-204	ENST00000368640	MYPN	Q86TC9	1320 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	NDUFB10	O96000	172 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	PDHB	P11177	359 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	SMARCA1	P28370	1054 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	TOB2	Q14106	344 aa	Predicted RBP	13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	TRIM22	Q8IYM9	498 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	FANCB	Q8NB91	859 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	ACER1	Q8TDN7	264 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	SNX21	Q969T3	373 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	KIF2C	Q99661	725 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	HOXC10	Q9NYD6	342 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	HPS5	Q9UPZ3	1129 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	MTMR7	Q9Y216	660 aa		13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.65	□□□□□ -0.22
LAMA4-204	ENST00000368640	PTPRF	P10586	1907 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	LOC285556	D6RIA3	1793 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640		A0A1W2PRG0	241 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	POTEM	A6NI47	508 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	PLA2G6	O60733	806 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	VCAM1	P19320	739 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	JAG1	P78504	1218 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	ZNF543	Q08ER8	600 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	TROAP	Q12815	778 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	GRM4	Q14833	912 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	ANKRD23	Q86SG2	305 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	CLEC10A	Q8IUN9	316 aa		13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	PRPF38A	Q8NAV1	312 aa	Known RBP	13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	PARK7	Q99497	189 aa	Known RBP	13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	SEC63	Q9UGP8	760 aa	Known RBP	13.64	□□□□□ -0.23
LAMA4-204	ENST00000368640	NID2	Q14112	1375 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	SPDYE4	A6NLX3	237 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640		K7ELQ4	463 aa	Predicted RBP	13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	ZBED4	O75132	1171 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	FLOT1	O75955	427 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	SNHG28	P0DPA3	235 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	XBP1	P17861	261 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	PDIA3	P30101	505 aa	Known RBP	13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	HOXA7	P31268	230 aa	Predicted RBP	13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	COG2	Q14746	738 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	NOL8	Q76FK4	1167 aa	Known RBP	13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	CCDC84	Q86UT8	332 aa	Predicted RBP	13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	SPICE1	Q8N0Z3	855 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	MB21D1	Q8N884	522 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	WASF1	Q92558	559 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	LLPH	Q9BRT6	129 aa	Known RBP	13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	EMILIN3	Q9NT22	766 aa		13.63	□□□□□ -0.23
LAMA4-204	ENST00000368640	TESPA1	A2RU30	521 aa	Predicted RBP	13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	TMEM232	C9JQI7	657 aa		13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	KLRF2	D3W0D1	207 aa		13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	PFKFB2	O60825	505 aa		13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	HMGN5	P82970	282 aa	Known RBP	13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	MKRN3	Q13064	507 aa	Known RBP	13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	PKN2	Q16513	984 aa	Known RBP	13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	FAM83B	Q5T0W9	1011 aa		13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	SIAH1	Q8IUQ4	282 aa		13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	RRP36	Q96EU6	259 aa	Known RBP	13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	SLF1	Q9BQI6	1058 aa		13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.62	□□□□□ -0.23
LAMA4-204	ENST00000368640	PALM3	A6NDB9	673 aa	Predicted RBP	13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	hCG_1984214	I3L0E3	225 aa		13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	PDIA4	P13667	645 aa	Known RBP	13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	COPB2	P35606	906 aa		13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	GCLC	P48506	637 aa	Predicted RBP	13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	STK3	Q13188	491 aa		13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	CATSPERG	Q6ZRH7	1159 aa		13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	ZNF713	Q8N859	430 aa	Predicted RBP	13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	SPZ1	Q9BXG8	430 aa		13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	GPCPD1	Q9NPB8	672 aa		13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	BRPF3	Q9ULD4	1205 aa		13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	TPCN1	Q9ULQ1	816 aa		13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.61	□□□□□ -0.23
LAMA4-204	ENST00000368640	PDHX	O00330	501 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	TM4SF4	P48230	202 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	CCT2	P78371	535 aa	Known RBP	13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	SSRP1	Q08945	709 aa	Known RBP	13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	HABP4	Q5JVS0	413 aa	Known RBP	13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	SYDE2	Q5VT97	1194 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	BTNL9	Q6UXG8	535 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	TMTC3	Q6ZXV5	915 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	KCTD1	Q719H9	257 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	CCAR1	Q8IX12	1150 aa	Known RBP	13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	CCDC144CP	Q8IYA2	1237 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	GTF3C6	Q969F1	213 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	KIFC2	Q96AC6	838 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	MS4A4A	Q96JQ5	239 aa		13.6	□□□□□ -0.23
LAMA4-204	ENST00000368640	MYL10	Q9BUA6	226 aa		13.6	□□□□□ -0.23

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