RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 EMILIN1Q9Y6C2 1016 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
TPR-201ENST00000367478 OCA2Q04671 838 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 NSFP46459 744 aaKnown RBP13.57□□□□□ -0.24
TPR-201ENST00000367478 RAPH1Q70E73 1250 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 SLFN12Q8IYM2 578 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 PSMB7Q99436 277 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 H7C1D1 291 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 PDE6AP16499 860 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
TPR-201ENST00000367478 TMEM247A6NEH6 219 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 EEF1GP26641 437 aaKnown RBP13.57□□□□□ -0.24
TPR-201ENST00000367478 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
TPR-201ENST00000367478 CWF19L2Q2TBE0 894 aaKnown RBP13.57□□□□□ -0.24
TPR-201ENST00000367478 RNF207Q6ZRF8 634 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 TEX11Q8IYF3 940 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 GIPC2Q8TF65 315 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 GRAMD4Q6IC98 578 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 SKA2Q8WVK7 121 aaPredicted RBP13.57□□□□□ -0.24
TPR-201ENST00000367478 YY1AP1Q9H869 796 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 TXKP42681 527 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 ART3Q13508 389 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 CCDC184Q52MB2 194 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 A6NJR5 290 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 TNNC2P02585 160 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 BFSP1Q12934 665 aa13.57□□□□□ -0.24
TPR-201ENST00000367478 FGD4Q96M96 766 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 HEXIM1O94992 359 aaKnown RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 PYGBP11216 843 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 PUM3Q15397 648 aaKnown RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 C10orf76Q5T2E6 689 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 RNF14Q9UBS8 474 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 HESX1Q9UBX0 185 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 ZFXP17010 805 aaPredicted RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 NCAPH2Q6IBW4 605 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 FBXL13Q8NEE6 735 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 LIG3P49916 1009 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 POLE3Q9NRF9 147 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 MAPK8IP1Q9UQF2 711 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 ATP1A2P50993 1020 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 ATICP31939 592 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 GFM2Q969S9 779 aaKnown RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 RBM6P78332 1123 aaKnown RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 LSM14BQ9BX40 385 aaKnown RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 SUCLA2Q9P2R7 463 aaPredicted RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 BIN2Q9UBW5 565 aaPredicted RBP13.56□□□□□ -0.24
TPR-201ENST00000367478 KCNJ18B7U540 433 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 NEK2P51955 445 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 KCNJ12Q14500 433 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 GALNT17Q6IS24 598 aa13.56□□□□□ -0.24
TPR-201ENST00000367478 ATP5HO75947 161 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 KRT8P05787 483 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 PDE1BQ01064 536 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 TAB2Q9NYJ8 693 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 ARMCX3Q9UH62 379 aaPredicted RBP13.55□□□□□ -0.24
TPR-201ENST00000367478 HSPA6P17066 643 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 KLC3Q6P597 504 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 MIGA1Q8NAN2 632 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 ZBED4O75132 1171 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 PTPREP23469 700 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 SLC1A4P43007 532 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 IL1RL1Q01638 556 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 NME8Q8N427 588 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 GPCPD1Q9NPB8 672 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 GDAP1L1Q96MZ0 367 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 ST7Q9NRC1 585 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 TOP2BQ02880 1626 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 IQGAP2Q13576 1575 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 NVLO15381 856 aaKnown RBP13.55□□□□□ -0.24
TPR-201ENST00000367478 KRT4P19013 534 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 CASP2P42575 452 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 ZBTB8OSQ8IWT0 167 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 MYOCDQ8IZQ8 938 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 MRPL50Q8N5N7 158 aaKnown RBP13.55□□□□□ -0.24
TPR-201ENST00000367478 APPBP2Q92624 585 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 RBM17Q96I25 401 aaKnown RBP13.55□□□□□ -0.24
TPR-201ENST00000367478 LRRC37BQ96QE4 947 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 ADPGKQ9BRR6 497 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 KRT82Q9NSB4 513 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 FAM207AQ9NSI2 230 aaPredicted RBP13.55□□□□□ -0.24
TPR-201ENST00000367478 ADAMTS2O95450 1211 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 NFKBIAP25963 317 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 PPARGP37231 505 aaPredicted RBP13.55□□□□□ -0.24
TPR-201ENST00000367478 PLEKHM2Q8IWE5 1019 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 RTCBQ9Y3I0 505 aaKnown RBP13.55□□□□□ -0.24
TPR-201ENST00000367478 ZFYVE9O95405 1425 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 CEP85Q6P2H3 762 aa13.55□□□□□ -0.24
TPR-201ENST00000367478 ZNF233A6NK53 670 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 EIF3BP55884 814 aaKnown RBP13.54□□□□□ -0.24
TPR-201ENST00000367478 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 U2AF1L4Q8WU68 220 aaKnown RBP13.54□□□□□ -0.24
TPR-201ENST00000367478 ABTB1Q969K4 478 aaPredicted RBP13.54□□□□□ -0.24
TPR-201ENST00000367478 IPO5O00410 1097 aaKnown RBP13.54□□□□□ -0.24
TPR-201ENST00000367478 SERPINI2O75830 405 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms