RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CYP27A1Q02318 531 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 PDE4CQ08493 712 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 LACRTQ9GZZ8 138 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 LIMA1Q9UHB6 759 aaKnown RBP15.29■□□□□ 0.04
PRKN-205ENST00000366897 PP2D1A8MPX8 630 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 CYP7A1P22680 504 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 IRF2BP1Q8IU81 584 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 CCDC51Q96ER9 411 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
PRKN-205ENST00000366897 DRC1Q96MC2 740 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 MACROD2A1Z1Q3 448 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 PDE2AO00408 941 aaPredicted RBP15.28■□□□□ 0.04
PRKN-205ENST00000366897 GGCXP38435 758 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 USP14P54578 494 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 SEC23AQ15436 765 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 NPY5RQ15761 445 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 CAGE1Q8TC20 777 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 RASGRP4Q8TDF6 673 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 RNF26Q9BY78 433 aaPredicted RBP15.28■□□□□ 0.04
PRKN-205ENST00000366897 WNK3Q9BYP7 1800 aa15.28■□□□□ 0.04
PRKN-205ENST00000366897 PARP1P09874 1014 aaKnown RBP15.27■□□□□ 0.04
PRKN-205ENST00000366897 FGFR2P21802 821 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 FECHP22830 423 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 NOP2P46087 812 aaKnown RBP15.27■□□□□ 0.04
PRKN-205ENST00000366897 FUT2Q10981 343 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 E2F4Q16254 413 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 TTC19Q6DKK2 380 aaPredicted RBP15.27■□□□□ 0.04
PRKN-205ENST00000366897 SMCR8Q8TEV9 937 aaPredicted RBP15.27■□□□□ 0.04
PRKN-205ENST00000366897 PIGBQ92521 554 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 PSMB7Q99436 277 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 POLD4Q9HCU8 107 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 HPCAL4Q9UM19 191 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 ZBTB1Q9Y2K1 713 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 ITIH6Q6UXX5 1313 aa15.27■□□□□ 0.04
PRKN-205ENST00000366897 SLC5A1P13866 664 aa15.27■□□□□ 0.03
PRKN-205ENST00000366897 XBP1P17861 261 aa15.27■□□□□ 0.03
PRKN-205ENST00000366897 C2orf54Q08AI8 447 aa15.27■□□□□ 0.03
PRKN-205ENST00000366897 EZH2Q15910 746 aaKnown RBP15.27■□□□□ 0.03
PRKN-205ENST00000366897 PDXDC2PQ6P474 469 aa15.27■□□□□ 0.03
PRKN-205ENST00000366897 KIAA1328Q86T90 577 aa15.27■□□□□ 0.03
PRKN-205ENST00000366897 GOLGA6L1Q8N7Z2 621 aa15.27■□□□□ 0.03
PRKN-205ENST00000366897 AFAP1L1Q8TED9 768 aa15.27■□□□□ 0.03
PRKN-205ENST00000366897 SAR1BQ9Y6B6 198 aa15.27■□□□□ 0.03
PRKN-205ENST00000366897 NKRFO15226 690 aaKnown RBP eCLIP15.26■□□□□ 0.03
PRKN-205ENST00000366897 DYNLL1P63167 89 aaKnown RBP15.26■□□□□ 0.03
PRKN-205ENST00000366897 EN1Q05925 392 aaPredicted RBP15.26■□□□□ 0.03
PRKN-205ENST00000366897 DNAJC21Q5F1R6 531 aaKnown RBP15.26■□□□□ 0.03
PRKN-205ENST00000366897 IFIT1BQ5T764 474 aaKnown RBP15.26■□□□□ 0.03
PRKN-205ENST00000366897 WDR59Q6PJI9 974 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 RASSF8Q8NHQ8 419 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 FERMT2Q96AC1 680 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 SMARCAL1Q9NZC9 954 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 RWDD2AQ9UIY3 292 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 LUC7L2Q9Y383 392 aaKnown RBP15.26■□□□□ 0.03
PRKN-205ENST00000366897 RPN1P04843 607 aaKnown RBP15.26■□□□□ 0.03
PRKN-205ENST00000366897 BAG6P46379 1132 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 ANKRD20A12PQ8NF67 263 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 OR8K1Q8NGG5 319 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 B4DLN1 442 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 SEMA3EO15041 775 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 PRPF6O94906 941 aaKnown RBP15.26■□□□□ 0.03
PRKN-205ENST00000366897 MATR3P43243 847 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■■■□ 23.9
PRKN-205ENST00000366897 CTR9Q6PD62 1173 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 JAKMIP2Q96AA8 810 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 MTMR7Q9Y216 660 aa15.26■□□□□ 0.03
PRKN-205ENST00000366897 TNS2Q63HR2 1409 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 LRRC10BA6NIK2 292 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 PDE8AO60658 829 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 ATP2C1P98194 919 aaPredicted RBP15.25■□□□□ 0.03
PRKN-205ENST00000366897 STIM1Q13586 685 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 TUBB2AQ13885 445 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 WDR93Q6P2C0 686 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 TMTC2Q8N394 836 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 HDAC7Q8WUI4 952 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 ESR2Q92731 530 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 SMARCC1Q92922 1105 aaPredicted RBP15.25■□□□□ 0.03
PRKN-205ENST00000366897 TUBB2BQ9BVA1 445 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 MED4Q9NPJ6 270 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 JADE2Q9NQC1 790 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 ZC3H4Q9UPT8 1303 aaKnown RBP15.25■□□□□ 0.03
PRKN-205ENST00000366897 APBA3O96018 575 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 ERCC3P19447 782 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 NLRP5P59047 1200 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 FAM47AQ5JRC9 791 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 KRT26Q7Z3Y9 468 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 MB21D1Q8N884 522 aa15.25■□□□□ 0.03
PRKN-205ENST00000366897 ZSCAN10Q96SZ4 725 aaPredicted RBP15.25■□□□□ 0.03
PRKN-205ENST00000366897 CDHR2Q9BYE9 1310 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 GTPBP6O43824 516 aaPredicted RBP15.24■□□□□ 0.03
PRKN-205ENST00000366897 STARD3NLO95772 234 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 TTC31Q49AM3 519 aaPredicted RBP15.24■□□□□ 0.03
PRKN-205ENST00000366897 PTF1AQ7RTS3 328 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 CATIPQ7Z7H3 387 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 SRBD1Q8N5C6 995 aaKnown RBP15.24■□□□□ 0.03
PRKN-205ENST00000366897 TNFRSF25Q93038 417 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 PCMTD1Q96MG8 357 aaPredicted RBP15.24■□□□□ 0.03
PRKN-205ENST00000366897 SLC4A9Q96Q91 983 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms