RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 PIGSQ96S52 555 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 TANGO6Q9C0B7 1094 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 RIOX1Q9H6W3 641 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
SNX6-201ENST00000362031 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 ADAMTS3O15072 1205 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
SNX6-201ENST00000362031 GJB2P29033 226 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 SNAPC2Q13487 334 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
SNX6-201ENST00000362031 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 KIFC2Q96AC6 838 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 PARP14Q460N5 1801 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 CCL15-CCL14A0A0B4J2E2 113 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 BTBD19C9JJ37 291 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 FLOT1O75955 427 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 FMNL1O95466 1100 aaPredicted RBP12.49□□□□□ -0.41
SNX6-201ENST00000362031 STAT2P52630 851 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 FOSBP53539 338 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 PKP1Q13835 747 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 CCL15Q16663 113 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 INTS4Q96HW7 963 aaKnown RBP12.49□□□□□ -0.41
SNX6-201ENST00000362031 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
SNX6-201ENST00000362031 CCDC196A0A1B0GTZ2 297 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■□□□□ 8.5
SNX6-201ENST00000362031 AOC2O75106 756 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 IKQ13123 557 aaPredicted RBP12.49□□□□□ -0.41
SNX6-201ENST00000362031 PPP2R5BQ15173 497 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 SYDE2Q5VT97 1194 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 PROCA1Q8NCQ7 364 aaPredicted RBP12.49□□□□□ -0.41
SNX6-201ENST00000362031 GPKOWQ92917 476 aaPredicted RBP eCLIP12.49□□□□□ -0.41
SNX6-201ENST00000362031 ATG4CQ96DT6 458 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 MTMR8Q96EF0 704 aa12.49□□□□□ -0.41
SNX6-201ENST00000362031 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
SNX6-201ENST00000362031 LLPHQ9BRT6 129 aaKnown RBP12.49□□□□□ -0.41
SNX6-201ENST00000362031 RASSF10A6NK89 507 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 PRPF3O43395 683 aaKnown RBP12.48□□□□□ -0.41
SNX6-201ENST00000362031 CYP2C8P10632 490 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 DDIT3P35638 169 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 GTF2A2P52657 109 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
SNX6-201ENST00000362031 R3HDMLQ9H3Y0 253 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 FEM1BQ9UK73 627 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 PPP1R9AQ9ULJ8 1098 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 AGTPBP1Q9UPW5 1226 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
SNX6-201ENST00000362031 ZNF536O15090 1300 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 DHX16O60231 1041 aaKnown RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 HSP90AA1P07900 732 aaKnown RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 SSRP1Q08945 709 aaKnown RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 DEFB115Q30KQ5 88 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 HHIPL1Q96JK4 782 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 ASCC2Q9H1I8 757 aaPredicted RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 PLA2G6O60733 806 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 CETPP11597 493 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 DSG3P32926 999 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 GNAQP50148 359 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 CDC37Q16543 378 aaPredicted RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 WWC2Q6AWC2 1192 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 CCDC174Q6PII3 467 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 REPS2Q8NFH8 660 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 COA7Q96BR5 231 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 LZTS2Q9BRK4 669 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 RNF26Q9BY78 433 aaPredicted RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 ADAMTS5Q9UNA0 930 aa12.47□□□□□ -0.41
SNX6-201ENST00000362031 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
SNX6-201ENST00000362031 MYH6P13533 1939 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 PDHXO00330 501 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 VWA5AO00534 786 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 SMARCA1P28370 1054 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 KIF23Q02241 960 aaPredicted RBP12.46□□□□□ -0.41
SNX6-201ENST00000362031 COG2Q14746 738 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 PFKFB3Q16875 520 aaPredicted RBP12.46□□□□□ -0.41
SNX6-201ENST00000362031 FASTKD5Q7L8L6 764 aaKnown RBP12.46□□□□□ -0.41
SNX6-201ENST00000362031 PRPF38AQ8NAV1 312 aaKnown RBP12.46□□□□□ -0.41
SNX6-201ENST00000362031 CHURC1Q8WUH1 139 aa12.46□□□□□ -0.41
SNX6-201ENST00000362031 CAPNS2Q96L46 248 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms