RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 CACNA2D3Q8IZS8 1091 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 AENQ8WTP8 325 aaKnown RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 CDK5RAP3Q96JB5 506 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 SH3GL2Q99962 352 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 KIF9Q9HAQ2 790 aa12.73□□□□□ -0.37
CNOT3-202ENST00000358389 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 TPX2Q9ULW0 747 aaKnown RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 REXO2Q9Y3B8 237 aaKnown RBP12.73□□□□□ -0.37
CNOT3-202ENST00000358389 GUCY1A2P33402 732 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 ZKSCAN8Q15776 578 aaPredicted RBP12.72□□□□□ -0.37
CNOT3-202ENST00000358389 ARFGAP2Q8N6H7 521 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 ARMC2Q8NEN0 867 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 MLXIPQ9HAP2 919 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 TCEAL9Q9UHQ7 104 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 IQSEC3Q9UPP2 1182 aaPredicted RBP12.72□□□□□ -0.37
CNOT3-202ENST00000358389 CEP170BQ9Y4F5 1589 aaPredicted RBP12.72□□□□□ -0.37
CNOT3-202ENST00000358389 NCK2O43639 380 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 TBC1D8BQ0IIM8 1120 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 PUS7LQ9H0K6 701 aaKnown RBP12.72□□□□□ -0.37
CNOT3-202ENST00000358389 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
CNOT3-202ENST00000358389 OPLAHO14841 1288 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 ACTN4O43707 911 aaKnown RBP12.72□□□□□ -0.37
CNOT3-202ENST00000358389 C21orf2O43822 256 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
CNOT3-202ENST00000358389 HERVK_113P62684 666 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 TCP11X2Q5H9J9 407 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 TANGO6Q9C0B7 1094 aa12.72□□□□□ -0.37
CNOT3-202ENST00000358389 TRMT112Q9UI30 125 aaKnown RBP12.72□□□□□ -0.37
CNOT3-202ENST00000358389 TMCO5BA8MYB1 307 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 BUB1O43683 1085 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 RANBP6O60518 1105 aaKnown RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 CCNHP51946 323 aaPredicted RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 IRX1P78414 480 aaPredicted RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 PAK2Q13177 524 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 LRRC24Q50LG9 513 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 PAPD7Q5XG87 772 aaKnown RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 PI16Q6UXB8 463 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 KLHL7Q8IXQ5 586 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 PLIN2Q99541 437 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 IFIH1Q9BYX4 1025 aaKnown RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 NHEJ1Q9H9Q4 299 aaPredicted RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 ZC3H4Q9UPT8 1303 aaKnown RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 TUBGCP6Q96RT7 1819 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 TRIM49BA6NDI0 452 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 MDH1P40925 334 aaKnown RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 CARSP49589 748 aaKnown RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 SARSP49591 514 aaKnown RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 RTN1Q16799 776 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 CYB5R4Q7L1T6 521 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 CABLES1Q8TDN4 633 aa12.71□□□□□ -0.37
CNOT3-202ENST00000358389 ACTR5Q9H9F9 607 aaPredicted RBP12.71□□□□□ -0.37
CNOT3-202ENST00000358389 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.38
CNOT3-202ENST00000358389 B4DLN1 442 aa12.71□□□□□ -0.38
CNOT3-202ENST00000358389 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.38
CNOT3-202ENST00000358389 AKAP4Q5JQC9 854 aa12.71□□□□□ -0.38
CNOT3-202ENST00000358389 OXER1Q8TDS5 423 aa12.71□□□□□ -0.38
CNOT3-202ENST00000358389 CYFIP2Q96F07 1278 aa12.71□□□□□ -0.38
CNOT3-202ENST00000358389 METTL22Q9BUU2 404 aaPredicted RBP12.71□□□□□ -0.38
CNOT3-202ENST00000358389 GDAQ9Y2T3 454 aa12.71□□□□□ -0.38
CNOT3-202ENST00000358389 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.38
CNOT3-202ENST00000358389 JCADQ9P266 1359 aa12.71□□□□□ -0.38
CNOT3-202ENST00000358389 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 PARP1P09874 1014 aaKnown RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 MYZAPP0CAP1 466 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 TMOD1P28289 359 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 TDRD12Q587J7 1177 aaKnown RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 FUKQ8N0W3 1084 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 GSDMAQ96QA5 445 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 YIPF3Q9GZM5 350 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 SRPRBQ9Y5M8 271 aaKnown RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 NRKQ7Z2Y5 1582 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 RIMS1Q86UR5 1692 aaKnown RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 ZSCAN5CA6NGD5 496 aaPredicted RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 MPHOSPH10O00566 681 aaKnown RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 UBLCP1Q8WVY7 318 aaPredicted RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 AGPAT5Q9NUQ2 364 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 KRT18P05783 430 aaKnown RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 TOB1P50616 345 aaPredicted RBP12.7□□□□□ -0.38
CNOT3-202ENST00000358389 SKOR1P84550 965 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 CDKAL1Q5VV42 579 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 ZBTB10Q96DT7 871 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 FAXDC2Q96IV6 333 aa12.7□□□□□ -0.38
CNOT3-202ENST00000358389 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 FAM107AO95990 144 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 ZAP70P43403 619 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 IFFO1Q0D2I5 559 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
CNOT3-202ENST00000358389 MS4A14Q96JA4 679 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 KRT12Q99456 494 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 HYOU1Q9Y4L1 999 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 HGSO14964 777 aaPredicted RBP12.69□□□□□ -0.38
CNOT3-202ENST00000358389 STARD3NLO95772 234 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 PBX1P40424 430 aa12.69□□□□□ -0.38
CNOT3-202ENST00000358389 DPYDQ12882 1025 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms