RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CAMTA1Q9Y6Y1 1673 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 CORO7P57737 925 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 SEC23AQ15436 765 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 MB21D1Q8N884 522 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 JAG2Q9Y219 1238 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 LAMB4A4D0S4 1761 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 ITIH6Q6UXX5 1313 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 MAP3K15Q6ZN16 1313 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 FER1L4A9Z1Z3 1794 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 ERVV-2B6SEH9 535 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 SLC5A1P13866 664 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 STAT6P42226 847 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 ATP2B2Q01814 1243 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 ICE2Q659A1 982 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 KCTD16Q68DU8 428 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 SRBD1Q8N5C6 995 aaKnown RBP11.37□□□□□ -0.59
PTPRA-203ENST00000356147 PIGBQ92521 554 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 ESR2Q92731 530 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 MLXIPQ9HAP2 919 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 CDHR2Q9BYE9 1310 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 ATRNO75882 1429 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 GOLGA6CA6NDK9 693 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 PPFIA4O75335 1185 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 GOLGA6DP0CG33 693 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 FUT2Q10981 343 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 CATIPQ7Z7H3 387 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 ZSCAN10Q96SZ4 725 aaPredicted RBP11.37□□□□□ -0.59
PTPRA-203ENST00000356147 LRRC1Q9BTT6 524 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 PLA2G12BQ9BX93 195 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 GOLGA6AQ9NYA3 693 aa11.37□□□□□ -0.59
PTPRA-203ENST00000356147 MKRN1Q9UHC7 482 aaKnown RBP11.37□□□□□ -0.59
PTPRA-203ENST00000356147 FECHP22830 423 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 GYG1P46976 350 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 ATP2C1P98194 919 aaPredicted RBP11.36□□□□□ -0.59
PTPRA-203ENST00000356147 ZNF658Q5TYW1 1059 aaPredicted RBP11.36□□□□□ -0.59
PTPRA-203ENST00000356147 SH2D3CQ8N5H7 860 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 HAUS4Q9H6D7 363 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 EFCC1Q9HA90 598 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 LRWD1Q9UFC0 647 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 GOLGA6BA6NDN3 693 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 LRRC10BA6NIK2 292 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 EXOC5O00471 708 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 PSMD14O00487 310 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 SEMA3EO15041 775 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 NCK2O43639 380 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 ATP1A2P50993 1020 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
PTPRA-203ENST00000356147 TUBB2AQ13885 445 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 FBXW10Q5XX13 1052 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 TUBB2BQ9BVA1 445 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 NHEJ1Q9H9Q4 299 aaPredicted RBP11.36□□□□□ -0.59
PTPRA-203ENST00000356147 BRMS1Q9HCU9 246 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 NUP188Q5SRE5 1749 aa11.36□□□□□ -0.59
PTPRA-203ENST00000356147 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
PTPRA-203ENST00000356147 RPS6KA5O75582 802 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 FGFR2P21802 821 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 CCDC96Q2M329 555 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 CCNI2Q6ZMN8 369 aaPredicted RBP11.35□□□□□ -0.59
PTPRA-203ENST00000356147 FAM76AQ8TAV0 307 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 BCAS4Q8TDM0 211 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 LRRC15Q8TF66 581 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 CAPN6Q9Y6Q1 641 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 PDE8AO60658 829 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 IRAK1P51617 712 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 IRX3P78415 501 aaPredicted RBP11.35□□□□□ -0.59
PTPRA-203ENST00000356147 TBC1D8BQ0IIM8 1120 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 TYW1BQ6NUM6 668 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 TMTC2Q8N394 836 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 GPATCH11Q8N954 259 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 KAT2BQ92831 832 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 ARL8AQ96BM9 186 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 SLC4A9Q96Q91 983 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 MYO1AQ9UBC5 1043 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 RASSF10A6NK89 507 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 LGALS16A8MUM7 142 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 ZNF263O14978 683 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 MOCS3O95396 460 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 STARD3NLO95772 234 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 CYP2D6P10635 497 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 IL2RBP14784 551 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 RNASE9P60153 205 aaKnown RBP11.35□□□□□ -0.59
PTPRA-203ENST00000356147 GNGT1P63211 74 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 SPAG1Q07617 926 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 TROAPQ12815 778 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 MAP9Q49MG5 647 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 NFRKBQ6P4R8 1299 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 TNFRSF25Q93038 417 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
PTPRA-203ENST00000356147 TMEM60Q9H2L4 133 aa11.35□□□□□ -0.59
PTPRA-203ENST00000356147 RNF41Q9H4P4 317 aaPredicted RBP11.35□□□□□ -0.59
PTPRA-203ENST00000356147 MAGEB6P1A0A0J9YX57 407 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 ESYT3A0FGR9 886 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 USP17L12C9JPN9 530 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 USP17L21D6R901 530 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 PRPF3O43395 683 aaKnown RBP11.34□□□□□ -0.59
PTPRA-203ENST00000356147 KRT86O43790 486 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 IPO7O95373 1038 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms