RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 GDPD2Q9HCC8 539 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 PICK1Q9NRD5 415 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 ELP1O95163 1332 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 PNMA6FA0A0J9YX94 578 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 ZBTB5O15062 677 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 FIBPO43427 364 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 PLA2G6O60733 806 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 CALML3P27482 149 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 KRT2P35908 639 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 GALNT17Q6IS24 598 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 HEATR3Q7Z4Q2 680 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 CCDC12Q8WUD4 166 aaPredicted RBP11.06□□□□□ -0.64
NPHP1-202ENST00000355301 LPAR1Q92633 364 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 CDCA5Q96FF9 252 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 ZNF396Q96N95 335 aaPredicted RBP11.06□□□□□ -0.64
NPHP1-202ENST00000355301 FEZ1Q99689 392 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 AS3MTQ9HBK9 375 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 BRMS1Q9HCU9 246 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 TFIP11Q9UBB9 837 aaKnown RBP11.06□□□□□ -0.64
NPHP1-202ENST00000355301 PHIPQ8WWQ0 1821 aa11.06□□□□□ -0.64
NPHP1-202ENST00000355301 DCAF8L1A6NGE4 600 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 USP17L10C9JJH3 530 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 TMEM232C9JQI7 657 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 STAT2P52630 851 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 NLRP5P59047 1200 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 NR5A1Q13285 461 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 SKOR2Q2VWA4 1001 aaPredicted RBP11.05□□□□□ -0.64
NPHP1-202ENST00000355301 OXER1Q8TDS5 423 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 TNFRSF25Q93038 417 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 USP28Q96RU2 1077 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 ZMYND12Q9H0C1 365 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 POLR3EQ9NVU0 708 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
NPHP1-202ENST00000355301 OTOFQ9HC10 1997 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 ESYT2A0FGR8 921 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 NF2P35240 595 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 USP14P54578 494 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 MAP3K9P80192 1104 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 ZYXQ15942 572 aaKnown RBP11.05□□□□□ -0.64
NPHP1-202ENST00000355301 FAM83BQ5T0W9 1011 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 SYDE2Q5VT97 1194 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.05□□□□□ -0.64
NPHP1-202ENST00000355301 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 ZNF280CQ8ND82 737 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 LEO1Q8WVC0 666 aaPredicted RBP11.05□□□□□ -0.64
NPHP1-202ENST00000355301 SPATA32Q96LK8 384 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 RTEL1Q9NZ71 1219 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 PCDHA4Q9UN74 947 aa11.05□□□□□ -0.64
NPHP1-202ENST00000355301 M0R2N6 131 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 WDR46O15213 610 aaKnown RBP11.04□□□□□ -0.64
NPHP1-202ENST00000355301 TRAK2O60296 914 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 PPP1R11O60927 126 aaPredicted RBP11.04□□□□□ -0.64
NPHP1-202ENST00000355301 IREB2P48200 963 aaKnown RBP11.04□□□□□ -0.64
NPHP1-202ENST00000355301 NAPAP54920 295 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 BACE1P56817 501 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 SPP2Q13103 211 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 MTMR2Q13614 643 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 PRKG1Q13976 671 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 VGLL4Q14135 290 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 MAP3K11Q16584 847 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 PPP1R18Q6NYC8 613 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 CHURC1Q8WUH1 139 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 RCOR1Q9UKL0 485 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 SNCAIPQ9Y6H5 919 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 ZHX2Q9Y6X8 837 aa11.04□□□□□ -0.64
NPHP1-202ENST00000355301 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 POTEJP0CG39 1038 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 GNA11P29992 359 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 NASPP49321 788 aaPredicted RBP11.03□□□□□ -0.64
NPHP1-202ENST00000355301 IKQ13123 557 aaPredicted RBP11.03□□□□□ -0.64
NPHP1-202ENST00000355301 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
NPHP1-202ENST00000355301 QRICH1Q2TAL8 776 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 RILPL1Q5EBL4 403 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 FAM160B2Q86V87 743 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 BLIDQ8IZY5 108 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 FTOQ9C0B1 505 aaKnown RBP eCLIP11.03□□□□□ -0.64
NPHP1-202ENST00000355301 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 FEM1BQ9UK73 627 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 PRR12Q9ULL5 1215 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 SMCO2A6NFE2 343 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 C19orf81C9J6K1 198 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 YEATS4O95619 227 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 TOB1P50616 345 aaPredicted RBP11.03□□□□□ -0.64
NPHP1-202ENST00000355301 UBE2HP62256 183 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 CEBPZQ03701 1054 aaKnown RBP11.03□□□□□ -0.64
NPHP1-202ENST00000355301 KLHL40Q2TBA0 621 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 ANO1Q5XXA6 986 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 COA7Q96BR5 231 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 C12orf42Q96LP6 360 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 C6orf50Q9HD87 102 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 AFG3L2Q9Y4W6 797 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 CSADQ9Y600 493 aa11.03□□□□□ -0.64
NPHP1-202ENST00000355301 DDX49Q9Y6V7 483 aaKnown RBP11.03□□□□□ -0.64
NPHP1-202ENST00000355301 TRIM75PA6NK02 468 aa11.02□□□□□ -0.65
NPHP1-202ENST00000355301 ADAMTS3O15072 1205 aa11.02□□□□□ -0.65
NPHP1-202ENST00000355301 GADD45BO75293 160 aaPredicted RBP11.02□□□□□ -0.65
NPHP1-202ENST00000355301 MBD3O95983 291 aa11.02□□□□□ -0.65
NPHP1-202ENST00000355301 VCAM1P19320 739 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms