RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 STIM1Q13586 685 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 IFIT1BQ5T764 474 aaKnown RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 ZNF572Q7Z3I7 529 aaPredicted RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 IRF2BP1Q8IU81 584 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 EIF3CQ99613 913 aaKnown RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 MTRQ99707 1265 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 DLEC1Q9Y238 1755 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 ZC3H4Q9UPT8 1303 aaKnown RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 A6NNZ2 444 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 PPP1R2P41236 205 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 HERVK_113P62684 666 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 TUBB8Q3ZCM7 444 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 FIGNQ5HY92 759 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 CCDC122Q5T0U0 273 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 CCNI2Q6ZMN8 369 aaPredicted RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 EFCAB13Q8IY85 973 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 DDX17Q92841 729 aaKnown RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 PURBQ96QR8 312 aaKnown RBP12.82□□□□□ -0.36
CAPN9-202ENST00000354537 TSGA10Q9BZW7 698 aa12.82□□□□□ -0.36
CAPN9-202ENST00000354537 SRGNP10124 158 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 PRLRP16471 622 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 CALML3P27482 149 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 CDC25AP30304 524 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 PRCPP42785 496 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 AMOTL1Q8IY63 956 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 FNBP4Q8N3X1 1017 aaPredicted RBP12.81□□□□□ -0.36
CAPN9-202ENST00000354537 MMS19Q96T76 1030 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 BLZF1Q9H2G9 400 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 ZNHIT6Q9NWK9 470 aaKnown RBP12.81□□□□□ -0.36
CAPN9-202ENST00000354537 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 RREB1Q92766 1687 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 CYP19A1P11511 503 aaPredicted RBP12.81□□□□□ -0.36
CAPN9-202ENST00000354537 DNAJC21Q5F1R6 531 aaKnown RBP12.81□□□□□ -0.36
CAPN9-202ENST00000354537 WDR59Q6PJI9 974 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 MMGT1Q8N4V1 131 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 DHTKD1Q96HY7 919 aaPredicted RBP12.81□□□□□ -0.36
CAPN9-202ENST00000354537 MAGEF1Q9HAY2 307 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 SH3GLB2Q9NR46 395 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 LRP2BPQ9P2M1 347 aa12.81□□□□□ -0.36
CAPN9-202ENST00000354537 CNTNAP5Q8WYK1 1306 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 VGLL3A8MV65 326 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 CLSTN1O94985 981 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 IPO7O95373 1038 aaKnown RBP12.8□□□□□ -0.36
CAPN9-202ENST00000354537 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
CAPN9-202ENST00000354537 CYP7A1P22680 504 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
CAPN9-202ENST00000354537 TTC31Q49AM3 519 aaPredicted RBP12.8□□□□□ -0.36
CAPN9-202ENST00000354537 GBP6Q6ZN66 633 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 PIGBQ92521 554 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 JAKMIP2Q96AA8 810 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 CRACR2AQ9BSW2 395 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 MAGEC2Q9UBF1 373 aaPredicted RBP12.8□□□□□ -0.36
CAPN9-202ENST00000354537 WNT7AO00755 349 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 RHOBTB3O94955 611 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 PLEKHA8P1O95397 391 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 SCG2P13521 617 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
CAPN9-202ENST00000354537 ZBED6P86452 979 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 IL17AQ16552 155 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 PFKFB3Q16875 520 aaPredicted RBP12.8□□□□□ -0.36
CAPN9-202ENST00000354537 FAM114A1Q8IWE2 563 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
CAPN9-202ENST00000354537 TTYH3Q9C0H2 523 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 CUEDC2Q9H467 287 aa12.8□□□□□ -0.36
CAPN9-202ENST00000354537 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
CAPN9-202ENST00000354537 PSMA7O14818 248 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 ORC4O43929 436 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 PRDM1O75626 825 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 TFRCP02786 760 aaKnown RBP12.79□□□□□ -0.36
CAPN9-202ENST00000354537 KIAA1328Q86T90 577 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 GIMAP8Q8ND71 665 aaPredicted RBP12.79□□□□□ -0.36
CAPN9-202ENST00000354537 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
CAPN9-202ENST00000354537 FAM184BQ9ULE4 1060 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 STAT6P42226 847 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 NLRP5P59047 1200 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 FOXR1Q6PIV2 292 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 RIOK1Q9BRS2 568 aaKnown RBP12.79□□□□□ -0.36
CAPN9-202ENST00000354537 CCSER1Q9C0I3 900 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 DISC1Q9NRI5 854 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 EXOC1Q9NV70 894 aa12.79□□□□□ -0.36
CAPN9-202ENST00000354537 MYH8P13535 1937 aa12.78□□□□□ -0.36
CAPN9-202ENST00000354537 NHSL1Q5SYE7 1610 aa12.78□□□□□ -0.36
CAPN9-202ENST00000354537 GOLGA8KD6RF30 607 aa12.78□□□□□ -0.36
CAPN9-202ENST00000354537 LAD1O00515 517 aa12.78□□□□□ -0.36
CAPN9-202ENST00000354537 HOXA7P31268 230 aaPredicted RBP12.78□□□□□ -0.36
CAPN9-202ENST00000354537 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
CAPN9-202ENST00000354537 COBLL1Q53SF7 1204 aa12.78□□□□□ -0.36
CAPN9-202ENST00000354537 MIGA1Q8NAN2 632 aa12.78□□□□□ -0.36
CAPN9-202ENST00000354537 FAM76AQ8TAV0 307 aa12.78□□□□□ -0.36
CAPN9-202ENST00000354537 AENQ8WTP8 325 aaKnown RBP12.78□□□□□ -0.36
CAPN9-202ENST00000354537 STAMQ92783 540 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms