RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
DDX4-201ENST00000353507 DTHD1Q6ZMT9 781 aa13.66□□□□□ -0.22
DDX4-201ENST00000353507 DZIP1Q86YF9 867 aaKnown RBP13.66□□□□□ -0.22
DDX4-201ENST00000353507 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
DDX4-201ENST00000353507 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
DDX4-201ENST00000353507 FAM205AQ6ZU69 1335 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 CTAGE15A4D2H0 777 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 CTAGE8P0CG41 777 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 WHAMMP3Q1A5X7 153 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 SBK1Q52WX2 424 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 CTAGE6Q86UF2 777 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 CTAGE4Q8IX94 777 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 MARCH10Q8NA82 808 aaPredicted RBP13.65□□□□□ -0.22
DDX4-201ENST00000353507 RASGRP4Q8TDF6 673 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 SH3GLB2Q9NR46 395 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 PDS5AQ29RF7 1337 aaKnown RBP13.65□□□□□ -0.22
DDX4-201ENST00000353507 ADAMTS3O15072 1205 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 PARP1P09874 1014 aaKnown RBP13.65□□□□□ -0.22
DDX4-201ENST00000353507 PIP4K2BP78356 416 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
DDX4-201ENST00000353507 PNMA1Q8ND90 353 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 ANKZF1Q9H8Y5 726 aa13.65□□□□□ -0.22
DDX4-201ENST00000353507 MAGEC2Q9UBF1 373 aaPredicted RBP13.65□□□□□ -0.22
DDX4-201ENST00000353507 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 ROBO1Q9Y6N7 1651 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 COL5A3P25940 1745 aaPredicted RBP13.64□□□□□ -0.23
DDX4-201ENST00000353507 TRIM49BA6NDI0 452 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 UBA7P41226 1012 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 TFAP4Q01664 338 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 CCDC148Q8NFR7 591 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 TRIM47Q96LD4 638 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 JAG2Q9Y219 1238 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 THRAP3Q9Y2W1 955 aaKnown RBP13.64□□□□□ -0.23
DDX4-201ENST00000353507 RNF225M0QZC1 329 aaPredicted RBP13.64□□□□□ -0.23
DDX4-201ENST00000353507 RHOXF2BP0C7M4 288 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
DDX4-201ENST00000353507 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 ADSSL1Q8N142 457 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 MSANTD4Q8NCY6 345 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 RHOXF2Q9BQY4 288 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 ANKRD2Q9GZV1 360 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 ZCCHC17Q9NP64 241 aaKnown RBP13.64□□□□□ -0.23
DDX4-201ENST00000353507 MYH1P12882 1939 aa13.64□□□□□ -0.23
DDX4-201ENST00000353507 PSMA7O14818 248 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 USP17L8P0C7I0 530 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 USP5P45974 858 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 GNAQP50148 359 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 C4orf32Q8N8J7 132 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 HNRNPLLQ8WVV9 542 aaKnown RBP13.63□□□□□ -0.23
DDX4-201ENST00000353507 MTMR7Q9Y216 660 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 LUC7L2Q9Y383 392 aaKnown RBP13.63□□□□□ -0.23
DDX4-201ENST00000353507 LGALS16A8MUM7 142 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 EIF3JO75822 258 aaKnown RBP13.63□□□□□ -0.23
DDX4-201ENST00000353507 NDUFA10O95299 355 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 ABL1P00519 1130 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 EEF1GP26641 437 aaKnown RBP13.63□□□□□ -0.23
DDX4-201ENST00000353507 ARHGAP25P42331 645 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 MCM6Q14566 821 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 HDXQ7Z353 690 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 HEATR3Q7Z4Q2 680 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 DGKHQ86XP1 1220 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 AMOTL1Q8IY63 956 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 NEK11Q8NG66 645 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 OR8K1Q8NGG5 319 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 NLRP3Q96P20 1036 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 PNKPQ96T60 521 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 MKNK2Q9HBH9 465 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
DDX4-201ENST00000353507 EPN1Q9Y6I3 576 aaPredicted RBP13.63□□□□□ -0.23
DDX4-201ENST00000353507 PP2D1A8MPX8 630 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
DDX4-201ENST00000353507 STAG2Q8N3U4 1231 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 MB21D1Q8N884 522 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 PLIN2Q99541 437 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 CHP1Q99653 195 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 GBP3Q9H0R5 595 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 RAB21Q9UL25 225 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 MYO6Q9UM54 1294 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 TTC26A0AVF1 554 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 MYL1P05976 194 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 ST5P78524 1137 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 KCNB1Q14721 858 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 INF2Q27J81 1249 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 CCDC47Q96A33 483 aaKnown RBP13.62□□□□□ -0.23
DDX4-201ENST00000353507 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 THAP9Q9H5L6 903 aa13.62□□□□□ -0.23
DDX4-201ENST00000353507 A0A1W2PQC6 194 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 MAP2K7O14733 419 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 TFRCP02786 760 aaKnown RBP13.61□□□□□ -0.23
DDX4-201ENST00000353507 TSPY3P0CV98 308 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 TSPY8P0CW00 308 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 GRM4Q14833 912 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 BEND6Q5SZJ8 279 aaPredicted RBP13.61□□□□□ -0.23
DDX4-201ENST00000353507 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 TMED8Q6PL24 325 aaPredicted RBP13.61□□□□□ -0.23
DDX4-201ENST00000353507 NAALADL2Q58DX5 795 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 CCDC178Q5BJE1 867 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
DDX4-201ENST00000353507 IRF2BP1Q8IU81 584 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms