RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 EXOC4Q96A65 974 aa20.19■□□□□ 0.82
CTSB-202ENST00000353047 IFIH1Q9BYX4 1025 aaKnown RBP20.19■□□□□ 0.82
CTSB-202ENST00000353047 MLXIPQ9HAP2 919 aa20.19■□□□□ 0.82
CTSB-202ENST00000353047 LRRIQ3A6PVS8 624 aaPredicted RBP20.18■□□□□ 0.82
CTSB-202ENST00000353047 TNNI2P48788 182 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 TUBGCP2Q9BSJ2 902 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 GOPCQ9HD26 462 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 TMC4Q7Z404 712 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 KSR1Q8IVT5 923 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 GSDMAQ96QA5 445 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 EHD4Q9H223 541 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 ANKZF1Q9H8Y5 726 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 A0A1B0GTH6 734 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 MPHOSPH10O00566 681 aaKnown RBP20.18■□□□□ 0.82
CTSB-202ENST00000353047 TCP11X2Q5H9J9 407 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 PANX2Q96RD6 677 aa20.18■□□□□ 0.82
CTSB-202ENST00000353047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.18■□□□□ 0.827e-9■■■■■ 48.8
CTSB-202ENST00000353047 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.18■□□□□ 0.82
CTSB-202ENST00000353047 KIF5BP33176 963 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 SLC44A5Q8NCS7 719 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 ISCA1Q9BUE6 129 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 CRNKL1Q9BZJ0 848 aaKnown RBP20.17■□□□□ 0.82
CTSB-202ENST00000353047 BIN2Q9UBW5 565 aaPredicted RBP20.17■□□□□ 0.82
CTSB-202ENST00000353047 CPDO75976 1380 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 HSF2BPO75031 334 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 USP17L8P0C7I0 530 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 GNAT2P19087 354 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 PICALMQ13492 652 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 TRIML1Q8N9V2 468 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 FERMT2Q96AC1 680 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 GPR101Q96P66 508 aaPredicted RBP20.17■□□□□ 0.82
CTSB-202ENST00000353047 RTL9Q8NET4 1388 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 C3P01024 1663 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 USP17L3A6NCW0 530 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 USP17L4A6NCW7 530 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 GOLGA6L10A6NI86 522 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 MAGEA1P43355 309 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 USP17L1Q7RTZ2 530 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 MAPKAPK5Q8IW41 473 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 SEC63Q9UGP8 760 aaKnown RBP20.17■□□□□ 0.82
CTSB-202ENST00000353047 ADGRL3Q9HAR2 1447 aa20.17■□□□□ 0.82
CTSB-202ENST00000353047 G3V3G9 751 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 WHAMMP3Q1A5X7 153 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 IQCEQ6IPM2 695 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 ADAT2Q7Z6V5 191 aaKnown RBP20.16■□□□□ 0.82
CTSB-202ENST00000353047 ALS2CR12Q96Q35 445 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 SCG2P13521 617 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 ARID4AP29374 1257 aaPredicted RBP20.16■□□□□ 0.82
CTSB-202ENST00000353047 RASSF7Q02833 373 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 CKAP4Q07065 602 aaKnown RBP20.16■□□□□ 0.82
CTSB-202ENST00000353047 BEND6Q5SZJ8 279 aaPredicted RBP20.16■□□□□ 0.82
CTSB-202ENST00000353047 KIFC2Q96AC6 838 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 NAA15Q9BXJ9 866 aaKnown RBP20.16■□□□□ 0.82
CTSB-202ENST00000353047 ERVV-2B6SEH9 535 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 BACH1O14867 736 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 RAPGEF1Q13905 1077 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 LLGL1Q15334 1064 aa20.16■□□□□ 0.82
CTSB-202ENST00000353047 EIF3CLB5ME19 914 aaKnown RBP20.15■□□□□ 0.82
CTSB-202ENST00000353047 PLEKP08567 350 aaPredicted RBP20.15■□□□□ 0.82
CTSB-202ENST00000353047 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
CTSB-202ENST00000353047 TMEM139Q8IV31 216 aa20.15■□□□□ 0.82
CTSB-202ENST00000353047 CALML4Q96GE6 196 aa20.15■□□□□ 0.82
CTSB-202ENST00000353047 EIF3CQ99613 913 aaKnown RBP20.15■□□□□ 0.82
CTSB-202ENST00000353047 PACSIN2Q9UNF0 486 aaPredicted RBP20.15■□□□□ 0.82
CTSB-202ENST00000353047 TRAF5O00463 557 aa20.15■□□□□ 0.82
CTSB-202ENST00000353047 C8orf74Q6P047 294 aa20.15■□□□□ 0.82
CTSB-202ENST00000353047 TAF4BQ92750 862 aa20.15■□□□□ 0.82
CTSB-202ENST00000353047 MEGF6O75095 1541 aa20.15■□□□□ 0.82
CTSB-202ENST00000353047 SH2D3CQ8N5H7 860 aa20.15■□□□□ 0.82
CTSB-202ENST00000353047 CNOT6LQ96LI5 555 aaKnown RBP20.14■□□□□ 0.82
CTSB-202ENST00000353047 MED15Q96RN5 788 aa20.14■□□□□ 0.82
CTSB-202ENST00000353047 FCER1AP12319 257 aa20.14■□□□□ 0.81
CTSB-202ENST00000353047 SGMS1Q86VZ5 419 aa20.14■□□□□ 0.81
CTSB-202ENST00000353047 BLIDQ8IZY5 108 aa20.14■□□□□ 0.81
CTSB-202ENST00000353047 FTCDO95954 541 aa20.14■□□□□ 0.81
CTSB-202ENST00000353047 SPATA31D1Q6ZQQ2 1576 aa20.14■□□□□ 0.81
CTSB-202ENST00000353047 ADGRA1Q86SQ6 560 aa20.14■□□□□ 0.81
CTSB-202ENST00000353047 RNF26Q9BY78 433 aaPredicted RBP20.14■□□□□ 0.81
CTSB-202ENST00000353047 PPANQ9NQ55 473 aaKnown RBP20.14■□□□□ 0.81
CTSB-202ENST00000353047 TLDC2A0PJX2 215 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 GTPBP6O43824 516 aaPredicted RBP20.13■□□□□ 0.81
CTSB-202ENST00000353047 BMP15O95972 392 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 PRDX5P30044 214 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 PDCLQ13371 301 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 NFRKBQ6P4R8 1299 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 RASGRP2Q7LDG7 609 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 CABP7Q86V35 215 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 STAG2Q8N3U4 1231 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 LACRTQ9GZZ8 138 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 NHEJ1Q9H9Q4 299 aaPredicted RBP20.13■□□□□ 0.81
CTSB-202ENST00000353047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.13■□□□□ 0.81
CTSB-202ENST00000353047 KLHL34Q8N239 644 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 SRBD1Q8N5C6 995 aaKnown RBP20.13■□□□□ 0.81
CTSB-202ENST00000353047 PNMA1Q8ND90 353 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 RSRC2Q7L4I2 434 aaKnown RBP20.13■□□□□ 0.81
CTSB-202ENST00000353047 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 SRLQ86TD4 932 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 CEP57Q86XR8 500 aa20.13■□□□□ 0.81
CTSB-202ENST00000353047 MARCH10Q8NA82 808 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms