RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 CDHR1Q96JP9 859 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 BLZF1Q9H2G9 400 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 PI4KBQ9UBF8 816 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 LRRIQ4A6NIV6 560 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 K7ENM7 598 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 PFKFB2O60825 505 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 PPP2R5AQ15172 486 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 UAP1Q16222 522 aaPredicted RBP17.07■□□□□ 0.32
PTPRO-202ENST00000348962 NKIRAS1Q9NYS0 192 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 RHOXF2BP0C7M4 288 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 TMEM191BP0C7N4 346 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 STAT1P42224 750 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 TUBB2AQ13885 445 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 RPS6KC1Q96S38 1066 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 TUBB2BQ9BVA1 445 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
PTPRO-202ENST00000348962 CRCPO75575 148 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 ERCC3P19447 782 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 ME3Q16798 604 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 ADALQ6DHV7 355 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 EXOC8Q8IYI6 725 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 SECISBP2LQ93073 1101 aaKnown RBP17.06■□□□□ 0.32
PTPRO-202ENST00000348962 MED10Q9BTT4 135 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 ARMCX3Q9UH62 379 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-202ENST00000348962 SERTAD1Q9UHV2 236 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 ATP2C2O75185 946 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 KRT222Q8N1A0 295 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 GIMAP7Q8NHV1 300 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 GPKOWQ92917 476 aaPredicted RBP eCLIP17.06■□□□□ 0.32
PTPRO-202ENST00000348962 NAPGQ99747 312 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-202ENST00000348962 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
PTPRO-202ENST00000348962 CAPN9O14815 690 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 ZEB2O60315 1214 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 XRCC6P12956 609 aaKnown RBP eCLIP17.06■□□□□ 0.32
PTPRO-202ENST00000348962 IGBP1P78318 339 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 IVLP07476 585 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 MMS19Q96T76 1030 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 C1orf112Q9NSG2 853 aa17.06■□□□□ 0.32
PTPRO-202ENST00000348962 MAIP1Q8WWC4 291 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 SLC7A3Q8WY07 619 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 SLC10A4Q96EP9 437 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 NUB1Q9Y5A7 615 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 BMP3P12645 472 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 PTH1RQ03431 593 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
PTPRO-202ENST00000348962 SORBS3O60504 671 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 AOC3Q16853 763 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 ZMYM1Q5SVZ6 1142 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 DDX23Q9BUQ8 820 aaKnown RBP17.05■□□□□ 0.32
PTPRO-202ENST00000348962 METTL14Q9HCE5 456 aaKnown RBP17.05■□□□□ 0.32
PTPRO-202ENST00000348962 AFF2P51816 1311 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 C8orf74Q6P047 294 aa17.05■□□□□ 0.32
PTPRO-202ENST00000348962 UBLCP1Q8WVY7 318 aaPredicted RBP17.05■□□□□ 0.32
PTPRO-202ENST00000348962 GMNNO75496 209 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 ASIC3Q9UHC3 531 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 FEZ2Q9UHY8 353 aaPredicted RBP17.04■□□□□ 0.32
PTPRO-202ENST00000348962 UTP11Q9Y3A2 253 aaKnown RBP17.04■□□□□ 0.32
PTPRO-202ENST00000348962 ITIH3Q06033 890 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 ARMCX5Q6P1M9 558 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 FOXP4Q8IVH2 680 aaPredicted RBP17.04■□□□□ 0.32
PTPRO-202ENST00000348962 MBD5Q9P267 1494 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 LRMPQ12912 555 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 SLC17A8Q8NDX2 589 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 RABGAP1Q9Y3P9 1069 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 ABL1P00519 1130 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 LRCH2Q5VUJ6 765 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
PTPRO-202ENST00000348962 TTLL3Q9Y4R7 772 aa17.04■□□□□ 0.32
PTPRO-202ENST00000348962 RBM6P78332 1123 aaKnown RBP17.03■□□□□ 0.32
PTPRO-202ENST00000348962 CPLX4Q7Z7G2 160 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 ZSWIM6Q9HCJ5 1215 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 BTBD18B2RXH4 712 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 NLRC4Q9NPP4 1024 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 PANK4Q9NVE7 773 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 CEP104O60308 925 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 GDF11O95390 407 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 WDR11Q9BZH6 1224 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 PNMA3Q9UL41 463 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 PPP2R5DQ14738 602 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 FAM26FQ5R3K3 315 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 LGSNQ5TDP6 509 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 RRAGAQ7L523 313 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 BSDC1Q9NW68 430 aaPredicted RBP17.03■□□□□ 0.32
PTPRO-202ENST00000348962 TSKSQ9UJT2 592 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 PALD1Q9ULE6 856 aa17.03■□□□□ 0.32
PTPRO-202ENST00000348962 hCG_1984214I3L0E3 225 aa17.02■□□□□ 0.32
PTPRO-202ENST00000348962 ADRA2BP18089 450 aa17.02■□□□□ 0.32
PTPRO-202ENST00000348962 PEX26Q7Z412 305 aa17.02■□□□□ 0.32
PTPRO-202ENST00000348962 ZNF713Q8N859 430 aaPredicted RBP17.02■□□□□ 0.32
PTPRO-202ENST00000348962 CCDC94Q9BW85 323 aaPredicted RBP17.02■□□□□ 0.32
PTPRO-202ENST00000348962 IMPACTQ9P2X3 320 aa17.02■□□□□ 0.32
PTPRO-202ENST00000348962 PRR36Q9H6K5 1346 aa17.02■□□□□ 0.32
PTPRO-202ENST00000348962 ERVK-7P63135 1459 aa17.02■□□□□ 0.32
PTPRO-202ENST00000348962 SND1Q7KZF4 910 aaKnown RBP eCLIP17.02■□□□□ 0.32
PTPRO-202ENST00000348962 TAOK1Q7L7X3 1001 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms