RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TXKP42681 527 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 PI16Q6UXB8 463 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 HS2ST1Q7LGA3 356 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 MICAL1Q8TDZ2 1067 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 MAN1B1Q9UKM7 699 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 NPHP4O75161 1426 aaPredicted RBP12.1□□□□□ -0.47
RPL28-201ENST00000344063 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 RAPGEF1Q13905 1077 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 SLC9C1Q4G0N8 1177 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 DHX40Q8IX18 779 aaKnown RBP12.1□□□□□ -0.47
RPL28-201ENST00000344063 FBF1Q8TES7 1133 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 WDR17Q8IZU2 1322 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 GSPT2Q8IYD1 628 aaKnown RBP12.09□□□□□ -0.47
RPL28-201ENST00000344063 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
RPL28-201ENST00000344063 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
RPL28-201ENST00000344063 RPAINQ86UA6 219 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 TBC1D31Q96DN5 1066 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 GLT8D2Q9H1C3 349 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 EPN1Q9Y6I3 576 aaPredicted RBP12.09□□□□□ -0.47
RPL28-201ENST00000344063 RABL6Q3YEC7 729 aaPredicted RBP12.09□□□□□ -0.47
RPL28-201ENST00000344063 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 GALNT17Q6IS24 598 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 IFT20Q8IY31 132 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 NUCKS1Q9H1E3 243 aaKnown RBP12.09□□□□□ -0.47
RPL28-201ENST00000344063 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
RPL28-201ENST00000344063 COPB1P53618 953 aaKnown RBP12.09□□□□□ -0.47
RPL28-201ENST00000344063 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
RPL28-201ENST00000344063 CETN3O15182 167 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 CYP27B1O15528 508 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 TADA3O75528 432 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 GCKP35557 465 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 IL6STP40189 918 aaPredicted RBP12.08□□□□□ -0.48
RPL28-201ENST00000344063 IQCB1Q15051 598 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 NLRP10Q86W26 655 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 NSRP1Q9H0G5 558 aaKnown RBP12.08□□□□□ -0.48
RPL28-201ENST00000344063 ZSWIM5Q9P217 1185 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 SALL3Q9BXA9 1300 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 TMEM110-MUSTN1A8MSY1 372 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 RPN1P04843 607 aaKnown RBP12.08□□□□□ -0.48
RPL28-201ENST00000344063 SRLQ86TD4 932 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 SNX29Q8TEQ0 813 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 CD163L1Q9NR16 1453 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 DPF2Q92785 391 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 IFIH1Q9BYX4 1025 aaKnown RBP12.08□□□□□ -0.48
RPL28-201ENST00000344063 SAP30BPQ9UHR5 308 aaKnown RBP12.08□□□□□ -0.48
RPL28-201ENST00000344063 RIPOR2Q9Y4F9 1068 aa12.08□□□□□ -0.48
RPL28-201ENST00000344063 SETD1BQ9UPS6 1966 aaKnown RBP12.08□□□□□ -0.48
RPL28-201ENST00000344063 F8W031 263 aaPredicted RBP12.07□□□□□ -0.48
RPL28-201ENST00000344063 TECPR2O15040 1411 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
RPL28-201ENST00000344063 PPP2R5AQ15172 486 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 RESP18Q5W5W9 173 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 TADA2BQ86TJ2 420 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 C2CD5Q86YS7 1000 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 REXO1Q8N1G1 1221 aaKnown RBP12.07□□□□□ -0.48
RPL28-201ENST00000344063 ARHGEF28Q8N1W1 1705 aaKnown RBP12.07□□□□□ -0.48
RPL28-201ENST00000344063 ZC3H12CQ9C0D7 883 aaKnown RBP12.07□□□□□ -0.48
RPL28-201ENST00000344063 TFCP2L1Q9NZI6 479 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 SLAIN2Q9P270 581 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 ASAP1Q9ULH1 1129 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 TMEM94Q12767 1356 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 BUB1O43683 1085 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 FAM13AO94988 1023 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 CXCR5P32302 372 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 GYG1P46976 350 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 CHRNDQ07001 517 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 SERPINA10Q9UK55 444 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 A0A1W2PRG0 241 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 CEP104O60308 925 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 C2orf54Q08AI8 447 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 NR5A1Q13285 461 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 MTF1Q14872 753 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 PPP1R7Q15435 360 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 KRT71Q3SY84 523 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 MCTP2Q6DN12 878 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 USP37Q86T82 979 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 MB21D2Q8IYB1 491 aaPredicted RBP12.07□□□□□ -0.48
RPL28-201ENST00000344063 NLRC4Q9NPP4 1024 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 ADCY7P51828 1080 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 PAK2Q13177 524 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 HAUS3Q68CZ6 603 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 STMN4Q9H169 189 aaPredicted RBP12.07□□□□□ -0.48
RPL28-201ENST00000344063 MAGEF1Q9HAY2 307 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 STK36Q9NRP7 1315 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 ABCC12Q96J65 1359 aa12.07□□□□□ -0.48
RPL28-201ENST00000344063 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
RPL28-201ENST00000344063 CALCRLQ16602 461 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 CCDC174Q6PII3 467 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 MMS22LQ6ZRQ5 1243 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 CCDC26Q8TAB7 109 aa12.06□□□□□ -0.48
RPL28-201ENST00000344063 STRBPQ96SI9 672 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms