RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 PPP1R18Q6NYC8 613 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 STAG2Q8N3U4 1231 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PANX2Q96RD6 677 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 EYA3Q99504 573 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 RWDD2AQ9UIY3 292 aa12.16□□□□□ -0.46
TRAF3IP2-201ENST00000340026 VWA3AA6NCI4 1184 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 GNA11P29992 359 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 COBLL1Q53SF7 1204 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 MFSD14BQ5SR56 506 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ZNF658Q5TYW1 1059 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 COL11A2P13942 1736 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SYNRGQ9UMZ2 1314 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 USP17L3A6NCW0 530 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 USP17L4A6NCW7 530 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ZSCAN12O43309 604 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 NOM1Q5C9Z4 860 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 USP17L1Q7RTZ2 530 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CCDC51Q96ER9 411 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ADD3Q9UEY8 706 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 LIMA1Q9UHB6 759 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CCDC194A0A1B0GVG4 234 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 PPEF1O14829 653 aaPredicted RBP12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 PLSCR1O15162 318 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 NPM3O75607 178 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 PARP1P09874 1014 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 PPP1R2P41236 205 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 FAM182BQ5T319 152 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 PDILTQ8N807 584 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 KLRF2D3W0D1 207 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 NPR1P16066 1061 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 HHIPL2Q6UWX4 724 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 DTHD1Q6ZMT9 781 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 TC2NQ8N9U0 490 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 ERO1AQ96HE7 468 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 MTRQ99707 1265 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 EHD4Q9H223 541 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 KBTBD4Q9NVX7 518 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 DAGLAQ9Y4D2 1042 aa12.14□□□□□ -0.47
TRAF3IP2-201ENST00000340026 GRAMD1CQ8IYS0 662 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 C6orf50Q9HD87 102 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 SRGNP10124 158 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 ATP2B1P20020 1258 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 ETF1P62495 437 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 KRT27Q7Z3Y8 459 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 RRP36Q96EU6 259 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 TMEM232C9JQI7 657 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 ALDH1B1P30837 517 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 MCM7P33993 719 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 NCBP1Q09161 790 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 TRIM14Q14142 442 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 NAALADL2Q58DX5 795 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 FOXR2Q6PJQ5 311 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 REXO1L1PQ8IX06 675 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 SRRTQ9BXP5 876 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 MTMR4Q9NYA4 1195 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 JAG2Q9Y219 1238 aa12.13□□□□□ -0.47
TRAF3IP2-201ENST00000340026 COL2A1P02458 1487 aaPredicted RBP12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 SLC26A4O43511 780 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 RHOBTB3O94955 611 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 CDK11BP21127 795 aaKnown RBP12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 SLC44A5Q8NCS7 719 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 STX8Q9UNK0 236 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 ADAMTS3O15072 1205 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 NONOQ15233 471 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 ZNF827Q17R98 1081 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 FILIP1LQ4L180 1135 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 CEP95Q96GE4 821 aa12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 BAG1Q99933 345 aaPredicted RBP12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 CCDC94Q9BW85 323 aaPredicted RBP12.12□□□□□ -0.47
TRAF3IP2-201ENST00000340026 H7C1D1 291 aa12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 RPN1P04843 607 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 PDHBP11177 359 aa12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 AFMP43652 599 aa12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 TEX2Q8IWB9 1127 aa12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 PROM2Q8N271 834 aa12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 NOC3LQ8WTT2 800 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
TRAF3IP2-201ENST00000340026 SLU7O95391 586 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms