RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ST18O60284 1047 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 PLA2G6O60733 806 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 TBC1D8O95759 1140 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 KIF5BP33176 963 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 METAP2P50579 478 aaKnown RBP eCLIP16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 BTNL9Q6UXG8 535 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 ZNF274Q96GC6 653 aaPredicted RBP16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 BEGAINQ9BUH8 593 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 CPVLQ9H3G5 476 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 HPS5Q9UPZ3 1129 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 PARP14Q460N5 1801 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 RCAN1P53805 252 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 CCT2P78371 535 aaKnown RBP16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 STK3Q13188 491 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 RTN1Q16799 776 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 SYDE2Q5VT97 1194 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 R3HDMLQ9H3Y0 253 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 RBM28Q9NW13 759 aaKnown RBP16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 WBP1LQ9NX94 342 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 PRR12Q9ULL5 1215 aa16.39■□□□□ 0.21
APOBEC3B-202ENST00000335760 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 TLR2O60603 784 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 PLEKHA8P1O95397 391 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 GNAQP50148 359 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 SNAP25P60880 206 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 GTF3C2Q8WUA4 911 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 PAGR1Q9BTK6 254 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 VAT1LQ9HCJ6 419 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 FAM217BQ9NTX9 383 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 CPA4Q9UI42 421 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 ADAMTS5Q9UNA0 930 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 LIMCH1Q9UPQ0 1083 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 CTDP1Q9Y5B0 961 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 NID2Q14112 1375 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 VWA5AO00534 786 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 PEX10O60683 326 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 ZBED4O75132 1171 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 CDC27P30260 824 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 POTEEQ6S8J3 1075 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 ADGRF4Q8IZF3 695 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 ANKRD13CQ8N6S4 541 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 CFHR5Q9BXR6 569 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 SLKQ9H2G2 1235 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
APOBEC3B-202ENST00000335760 CEP350Q5VT06 3117 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 PFKFB2O60825 505 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 CNMDO75829 334 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 LARGE1O95461 756 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 PPP2R5BQ15173 497 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 ME3Q16798 604 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 TMTC3Q6ZXV5 915 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 MB21D1Q8N884 522 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 SLC38A10Q9HBR0 1119 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 TXNRD2Q9NNW7 524 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
APOBEC3B-202ENST00000335760 A0A0G2JMZ2 1700 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 COL11A1P12107 1806 aaPredicted RBP16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 FDX1P10109 184 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 SCRN1Q12765 414 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 TMEM132BQ14DG7 1078 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 SLC35G1Q2M3R5 365 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 CCDC174Q6PII3 467 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 NECAB1Q8N987 351 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 ZSCAN31Q96LW9 406 aaPredicted RBP16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 RIOX1Q9H6W3 641 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 JMJD4Q9H9V9 463 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 TSKSQ9UJT2 592 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 RABGAP1Q9Y3P9 1069 aa16.36■□□□□ 0.21
APOBEC3B-202ENST00000335760 CYTH3O43739 400 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 BCRP11274 1271 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 SMARCA1P28370 1054 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 MCM2P49736 904 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 ERVK-24P63145 666 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 PLS1Q14651 629 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 CPXCR1Q8N123 301 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 GPRC5AQ8NFJ5 357 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 PIBF1Q8WXW3 757 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
APOBEC3B-202ENST00000335760 MORF4L1Q9UBU8 362 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms