RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ABL1P00519 1130 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 USP4Q13107 963 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 TCIRG1Q13488 830 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 HIBCHQ6NVY1 386 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-202ENST00000333611 NBPF5PQ86XG9 351 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-202ENST00000333611 PARP9Q8IXQ6 854 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 CCDC13Q8IYE1 715 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-202ENST00000333611 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 TMEM165Q9HC07 324 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 TPX2Q9ULW0 747 aaKnown RBP13.23□□□□□ -0.29
LIMK2-202ENST00000333611 SYNRGQ9UMZ2 1314 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 MED1Q15648 1581 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-202ENST00000333611 ZPR1O75312 459 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 CRYMQ14894 314 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 HLFQ16534 295 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 RRAGBQ5VZM2 374 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 CAPRIN2Q6IMN6 1127 aaKnown RBP13.23□□□□□ -0.29
LIMK2-202ENST00000333611 MLKLQ8NB16 471 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 TRIM10Q9UDY6 481 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 SMIM22K7EJ46 135 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 TOB1P50616 345 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-202ENST00000333611 IFNL3Q8IZI9 196 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 SDR42E1Q8WUS8 393 aa13.23□□□□□ -0.29
LIMK2-202ENST00000333611 IRS4O14654 1257 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-202ENST00000333611 C2orf54Q08AI8 447 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 ACCSLQ4AC99 568 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 TMEM139Q8IV31 216 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 CIAO1O76071 339 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 MAP3K12Q12852 859 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-202ENST00000333611 ZNF483Q8TF39 744 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-202ENST00000333611 WASF1Q92558 559 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 RRP36Q96EU6 259 aaKnown RBP13.22□□□□□ -0.29
LIMK2-202ENST00000333611 TMEM87BQ96K49 555 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 PYGLP06737 847 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 GUCY2FP51841 1108 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 KCTD19Q17RG1 926 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-202ENST00000333611 IGDCC4Q8TDY8 1250 aa13.22□□□□□ -0.29
LIMK2-202ENST00000333611 MACROD2A1Z1Q3 448 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 TRIM75PA6NK02 468 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 MMP1P03956 469 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 RNASE9P60153 205 aaKnown RBP13.21□□□□□ -0.29
LIMK2-202ENST00000333611 NSMCE1Q8WV22 266 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 ARL8AQ96BM9 186 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 V9GY48 417 aaPredicted RBP13.21□□□□□ -0.29
LIMK2-202ENST00000333611 CYP2D7A0A087X1C5 515 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 SMIM24O75264 130 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 HDLBPQ00341 1268 aaKnown RBP13.21□□□□□ -0.29
LIMK2-202ENST00000333611 TSR1Q2NL82 804 aaKnown RBP13.21□□□□□ -0.29
LIMK2-202ENST00000333611 RILPL1Q5EBL4 403 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 COG1Q8WTW3 980 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 LMBR1Q8WVP7 490 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 DYDC1Q8WWB3 177 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
LIMK2-202ENST00000333611 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.29
LIMK2-202ENST00000333611 KRT14P02533 472 aa13.21□□□□□ -0.3
LIMK2-202ENST00000333611 KCNJ6P48051 423 aa13.21□□□□□ -0.3
LIMK2-202ENST00000333611 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.3
LIMK2-202ENST00000333611 SYMPKQ92797 1274 aaKnown RBP13.21□□□□□ -0.3
LIMK2-202ENST00000333611 KCND1Q9NSA2 647 aa13.21□□□□□ -0.3
LIMK2-202ENST00000333611 FBXO2Q9UK22 296 aaPredicted RBP13.21□□□□□ -0.3
LIMK2-202ENST00000333611 L3MBTL1Q9Y468 752 aa13.21□□□□□ -0.3
LIMK2-202ENST00000333611 CPDO75976 1380 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 SNUPNO95149 360 aaKnown RBP13.2□□□□□ -0.3
LIMK2-202ENST00000333611 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
LIMK2-202ENST00000333611 RWDD2BP57060 319 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 NTRK3Q16288 839 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 TTLL11Q8NHH1 800 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 KCNV2Q8TDN2 545 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 HNRNPLLQ8WVV9 542 aaKnown RBP13.2□□□□□ -0.3
LIMK2-202ENST00000333611 STRBPQ96SI9 672 aaKnown RBP13.2□□□□□ -0.3
LIMK2-202ENST00000333611 EPB41L4AQ9HCS5 686 aaPredicted RBP13.2□□□□□ -0.3
LIMK2-202ENST00000333611 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
LIMK2-202ENST00000333611 PTPREP23469 700 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 MCM7P33993 719 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
LIMK2-202ENST00000333611 PLCD1P51178 756 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 CYB5D1Q6P9G0 228 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 ENOX1Q8TC92 643 aaKnown RBP13.2□□□□□ -0.3
LIMK2-202ENST00000333611 STAMBPL1Q96FJ0 436 aa13.2□□□□□ -0.3
LIMK2-202ENST00000333611 OPA1O60313 960 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 MMS19Q96T76 1030 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 ZNF185O15231 689 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
LIMK2-202ENST00000333611 KRT9P35527 623 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 BCAMP50895 628 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 FCHSD1Q86WN1 690 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 MED15Q96RN5 788 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 CEP131Q9UPN4 1083 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 XBP1P17861 261 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 NNTQ13423 1086 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms