RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 PDS5AQ29RF7 1337 aaKnown RBP13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 SPATA31A5Q5VU36 1347 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 SPATA31A7Q8IWB4 1347 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 PRCPP42785 496 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 TUBB4BP68371 445 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 E2F4Q16254 413 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 STAG2Q8N3U4 1231 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 PARD6BQ9BYG5 372 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 USP17L3A6NCW0 530 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 USP17L4A6NCW7 530 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 VEGFAP15692 232 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 C12orf60Q5U649 245 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 USP17L1Q7RTZ2 530 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 ACRBPQ8NEB7 543 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 SLF1Q9BQI6 1058 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 ST7Q9NRC1 585 aa13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 SAP30BPQ9UHR5 308 aaKnown RBP13.16□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 NHSL1Q5SYE7 1610 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 FANCGO15287 622 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 CTAGE8P0CG41 777 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 LETM2Q2VYF4 491 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 APTXQ7Z2E3 356 aaKnown RBP13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 CTAGE4Q8IX94 777 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 VAT1LQ9HCJ6 419 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 DOCK2Q92608 1830 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 GNA11P29992 359 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 RFC4P35249 363 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 AMPD3Q01432 767 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 MAPKAPK5Q8IW41 473 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 SLC35F6Q8N357 371 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 OR8K1Q8NGG5 319 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 C6orf50Q9HD87 102 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 MYH2Q9UKX2 1941 aa13.15□□□□□ -0.3
CSPG4P4Y-201ENST00000333235 DUOX1Q9NRD9 1551 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 FAM193AP78312 1265 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 DIXDC1Q155Q3 683 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 KIAA1328Q86T90 577 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 SH3RF3Q8TEJ3 882 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 LAD1O00515 517 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 MYL1P05976 194 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 PBX1P40424 430 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 ASIC1P78348 528 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 GRM4Q14833 912 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CSGALNACT2Q8N6G5 542 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 LRRC10BA6NIK2 292 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 MTIF2P46199 727 aaKnown RBP13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 EPN1Q9Y6I3 576 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 BCL9LQ86UU0 1499 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CCDC151A5D8V7 595 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 BRD3Q15059 726 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 IL17AQ16552 155 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CABP7Q86V35 215 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 FAM114A1Q8IWE2 563 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 RRP36Q96EU6 259 aaKnown RBP13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 CALML4Q96GE6 196 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 NGLY1Q96IV0 654 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 FAM205AQ6ZU69 1335 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 BICDL2A1A5D9 508 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 TRIM49BA6NDI0 452 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 SMC1AQ14683 1233 aaKnown RBP13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 KRT25Q7Z3Z0 450 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 BARHL2Q9NY43 387 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 MARCH6O60337 910 aa13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
CSPG4P4Y-201ENST00000333235 PDE4DQ08499 809 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms