RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 GOPCQ9HD26 462 aa26.8■■□□□ 1.88
TSEN54-201ENST00000333213 GOLGA6L22H0YM25 854 aa26.79■■□□□ 1.88
TSEN54-201ENST00000333213 PPP1R11O60927 126 aaPredicted RBP26.79■■□□□ 1.88
TSEN54-201ENST00000333213 HEATR3Q7Z4Q2 680 aa26.79■■□□□ 1.88
TSEN54-201ENST00000333213 BRAPQ7Z569 592 aa26.79■■□□□ 1.88
TSEN54-201ENST00000333213 PAPPA2Q9BXP8 1791 aa26.79■■□□□ 1.88
TSEN54-201ENST00000333213 TMEM232C9JQI7 657 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 KRT85P78386 507 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 MYSM1Q5VVJ2 828 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.78■■□□□ 1.88
TSEN54-201ENST00000333213 TMEM87AQ8NBN3 555 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 USP28Q96RU2 1077 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 FOXP1Q9H334 677 aaPredicted RBP26.78■■□□□ 1.88
TSEN54-201ENST00000333213 RRAGCQ9HB90 399 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 FAM83BQ5T0W9 1011 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 SH2D4AQ9H788 454 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 SH3GLB2Q9NR46 395 aa26.78■■□□□ 1.88
TSEN54-201ENST00000333213 SAFBQ15424 915 aaKnown RBP eCLIP26.77■■□□□ 1.88
TSEN54-201ENST00000333213 EARS2Q5JPH6 523 aaKnown RBP26.77■■□□□ 1.88
TSEN54-201ENST00000333213 NOL9Q5SY16 702 aaKnown RBP26.77■■□□□ 1.88
TSEN54-201ENST00000333213 BTNL9Q6UXG8 535 aa26.77■■□□□ 1.88
TSEN54-201ENST00000333213 NOSTRINQ8IVI9 506 aa26.77■■□□□ 1.88
TSEN54-201ENST00000333213 KIAA1683Q9H0B3 1180 aa26.77■■□□□ 1.88
TSEN54-201ENST00000333213 SEC63Q9UGP8 760 aaKnown RBP26.77■■□□□ 1.88
TSEN54-201ENST00000333213 TNFRSF25Q93038 417 aa26.77■■□□□ 1.88
TSEN54-201ENST00000333213 FEZ1Q99689 392 aa26.77■■□□□ 1.88
TSEN54-201ENST00000333213 PHIPQ8WWQ0 1821 aa26.76■■□□□ 1.87
TSEN54-201ENST00000333213 GADD45BO75293 160 aaPredicted RBP26.76■■□□□ 1.87
TSEN54-201ENST00000333213 NLRP5P59047 1200 aa26.76■■□□□ 1.87
TSEN54-201ENST00000333213 SPP2Q13103 211 aa26.76■■□□□ 1.87
TSEN54-201ENST00000333213 NOM1Q5C9Z4 860 aaKnown RBP26.76■■□□□ 1.87
TSEN54-201ENST00000333213 WDR18Q9BV38 432 aa26.76■■□□□ 1.87
TSEN54-201ENST00000333213 PICK1Q9NRD5 415 aa26.76■■□□□ 1.87
TSEN54-201ENST00000333213 KRT2P35908 639 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 CEBPZQ03701 1054 aaKnown RBP26.75■■□□□ 1.87
TSEN54-201ENST00000333213 MTMR2Q13614 643 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 VGLL4Q14135 290 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 MAP1SQ66K74 1059 aaPredicted RBP26.75■■□□□ 1.87
TSEN54-201ENST00000333213 MOB2Q70IA6 237 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 SNCAIPQ9Y6H5 919 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 ZHX2Q9Y6X8 837 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 PNMA6FA0A0J9YX94 578 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 FAM205CA6NFA0 338 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 ZBTB5O15062 677 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 SNAP25P60880 206 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 GNL2Q13823 731 aaKnown RBP26.75■■□□□ 1.87
TSEN54-201ENST00000333213 COA7Q96BR5 231 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 EMILIN3Q9NT22 766 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 CLEC11AQ9Y240 323 aa26.75■■□□□ 1.87
TSEN54-201ENST00000333213 OTOFQ9HC10 1997 aa26.74■■□□□ 1.87
TSEN54-201ENST00000333213 PPP1R12BO60237 982 aaPredicted RBP26.74■■□□□ 1.87
TSEN54-201ENST00000333213 MAP3K9P80192 1104 aa26.74■■□□□ 1.87
TSEN54-201ENST00000333213 FMR1Q06787 632 aaKnown RBP eCLIP26.74■■□□□ 1.87
TSEN54-201ENST00000333213 LEO1Q8WVC0 666 aaPredicted RBP26.74■■□□□ 1.87
TSEN54-201ENST00000333213 M0R2N6 131 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 TOB1P50616 345 aaPredicted RBP26.73■■□□□ 1.87
TSEN54-201ENST00000333213 STAT2P52630 851 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 QRICH1Q2TAL8 776 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 SYDE2Q5VT97 1194 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 ZNF280CQ8ND82 737 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 ZMYND12Q9H0C1 365 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 PRR12Q9ULL5 1215 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 CLIC4Q9Y696 253 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 CDC37Q16543 378 aaPredicted RBP26.73■■□□□ 1.87
TSEN54-201ENST00000333213 SCAND2PQ9GZW5 306 aaPredicted RBP26.73■■□□□ 1.87
TSEN54-201ENST00000333213 CFAP45Q9UL16 551 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 PCDHA4Q9UN74 947 aa26.73■■□□□ 1.87
TSEN54-201ENST00000333213 NAPAP54920 295 aa26.72■■□□□ 1.87
TSEN54-201ENST00000333213 BACE1P56817 501 aa26.72■■□□□ 1.87
TSEN54-201ENST00000333213 IKQ13123 557 aaPredicted RBP26.72■■□□□ 1.87
TSEN54-201ENST00000333213 GPT2Q8TD30 523 aa26.72■■□□□ 1.87
TSEN54-201ENST00000333213 ZNF396Q96N95 335 aaPredicted RBP26.72■■□□□ 1.87
TSEN54-201ENST00000333213 NMRK2Q9NPI5 230 aa26.72■■□□□ 1.87
TSEN54-201ENST00000333213 FBXO28Q9NVF7 368 aa26.72■■□□□ 1.87
TSEN54-201ENST00000333213 TRIM75PA6NK02 468 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 TRAF5O00463 557 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 ATL3Q6DD88 541 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 BLIDQ8IZY5 108 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 CCDC148Q8NFR7 591 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 CNKSR2Q8WXI2 1034 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 SPATA32Q96LK8 384 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 RASGRP4Q8TDF6 673 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 LPAR1Q92633 364 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 AS3MTQ9HBK9 375 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 RTEL1Q9NZ71 1219 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 RCOR1Q9UKL0 485 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 AFG3L2Q9Y4W6 797 aa26.71■■□□□ 1.87
TSEN54-201ENST00000333213 SMCO2A6NFE2 343 aa26.7■■□□□ 1.86
TSEN54-201ENST00000333213 CALML3P27482 149 aa26.7■■□□□ 1.86
TSEN54-201ENST00000333213 DAGLBQ8NCG7 672 aa26.7■■□□□ 1.86
TSEN54-201ENST00000333213 ELP1O95163 1332 aa26.7■■□□□ 1.86
TSEN54-201ENST00000333213 hCG_1984214I3L0E3 225 aa26.69■■□□□ 1.86
TSEN54-201ENST00000333213 PLA2G6O60733 806 aa26.69■■□□□ 1.86
TSEN54-201ENST00000333213 VCAM1P19320 739 aa26.69■■□□□ 1.86
TSEN54-201ENST00000333213 MAP3K11Q16584 847 aa26.69■■□□□ 1.86
TSEN54-201ENST00000333213 FAM177A1Q8N128 213 aaPredicted RBP26.69■■□□□ 1.86
TSEN54-201ENST00000333213 ZNF713Q8N859 430 aaPredicted RBP26.69■■□□□ 1.86
TSEN54-201ENST00000333213 POLR3EQ9NVU0 708 aa26.69■■□□□ 1.86
TSEN54-201ENST00000333213 WDR46O15213 610 aaKnown RBP26.69■■□□□ 1.86
TSEN54-201ENST00000333213 NF2P35240 595 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms