RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 MMP1P03956 469 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 XBP1P17861 261 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 KIF23Q02241 960 aaPredicted RBP13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 LDLRAD1Q5T700 205 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 MCTP1Q6DN14 999 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 TYW1BQ6NUM6 668 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 CHAMP1Q96JM3 812 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 ZNF408Q9H9D4 720 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 ELP3Q9H9T3 547 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
TRIM49B-201ENST00000332682 PARP14Q460N5 1801 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 TCHHQ07283 1943 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 SPDYE5A6NIY4 337 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 KIF28PB7ZC32 967 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 STXBP3O00186 592 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 VCAM1P19320 739 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 STAT2P52630 851 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 NPY5RQ15761 445 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 HEATR3Q7Z4Q2 680 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 C12orf42Q96LP6 360 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 ZSCAN16Q9H4T2 348 aaPredicted RBP13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 SH3GLB2Q9NR46 395 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 BARHL2Q9NY43 387 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 ATP6V1DQ9Y5K8 247 aa13.94□□□□□ -0.18
TRIM49B-201ENST00000332682 TRPM7Q96QT4 1865 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 LOC285556D6RIA3 1793 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 PNMA6FA0A0J9YX94 578 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 C19orf81C9J6K1 198 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 ZBTB5O15062 677 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 PLA2G6O60733 806 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 ITGBL1O95965 494 aaPredicted RBP13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 HMGCS2P54868 508 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 PPATQ06203 517 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 CDC37Q16543 378 aaPredicted RBP13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 FOXD4L6Q3SYB3 417 aaPredicted RBP13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 FOXD4L3Q6VB84 417 aaPredicted RBP13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 ERO1BQ86YB8 467 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 DIS3L2Q8IYB7 885 aaKnown RBP13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 FAM177A1Q8N128 213 aaPredicted RBP13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 PRR12Q9ULL5 1215 aa13.93□□□□□ -0.18
TRIM49B-201ENST00000332682 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 hCG_1984214I3L0E3 225 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 FKBP1BP68106 108 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 FAM173BQ6P4H8 233 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 FAM160B2Q86V87 743 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 ZNF713Q8N859 430 aaPredicted RBP13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 CCDC148Q8NFR7 591 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 RBM46Q8TBY0 533 aaKnown RBP13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 CHURC1Q8WUH1 139 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 GPBP1L1Q9HC44 474 aaPredicted RBP13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 GBA2Q9HCG7 927 aaPredicted RBP13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 FBXO28Q9NVF7 368 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 FEM1BQ9UK73 627 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 RLFQ13129 1914 aa13.92□□□□□ -0.18
TRIM49B-201ENST00000332682 BTBD18B2RXH4 712 aa13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 IRF6O14896 467 aa13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 CELF2O95319 508 aaKnown RBP13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 SAFBQ15424 915 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 BRAPQ7Z569 592 aa13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 OXER1Q8TDS5 423 aa13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 RPAP3Q9H6T3 665 aaPredicted RBP13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.91□□□□□ -0.18
TRIM49B-201ENST00000332682 CALML3P27482 149 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 NAPAP54920 295 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 NLRP5P59047 1200 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 DNM1Q05193 864 aaKnown RBP13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 NR5A1Q13285 461 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 PPIL2Q13356 520 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 NFKBIBQ15653 356 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 KIFC2Q96AC6 838 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 OPTNQ96CV9 577 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 TANGO6Q9C0B7 1094 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 TMOD4Q9NZQ9 345 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 KCNH4Q9UQ05 1017 aa13.9□□□□□ -0.18
TRIM49B-201ENST00000332682 ESYT2A0FGR8 921 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 KIF3CO14782 793 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 ADAMTS3O15072 1205 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 MCM4P33991 863 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 KRT2P35908 639 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 SNAP25P60880 206 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 CST9Q5W186 159 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 PPP1R18Q6NYC8 613 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 NOSTRINQ8IVI9 506 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 DAGLBQ8NCG7 672 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 TNFRSF25Q93038 417 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 COA7Q96BR5 231 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms