RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 YWHAGP61981 247 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMAD3-201ENST00000327367 TTBK2Q6IQ55 1244 aa18.03■□□□□ 0.48
SMAD3-201ENST00000327367 C16orf87Q6PH81 154 aa18.03■□□□□ 0.48
SMAD3-201ENST00000327367 GRK7Q8WTQ7 553 aa18.03■□□□□ 0.48
SMAD3-201ENST00000327367 MAIP1Q8WWC4 291 aa18.03■□□□□ 0.48
SMAD3-201ENST00000327367 IWS1Q96ST2 819 aa18.03■□□□□ 0.48
SMAD3-201ENST00000327367 CLIC4Q9Y696 253 aa18.03■□□□□ 0.48
SMAD3-201ENST00000327367 SLC12A1Q13621 1099 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 ST7Q9NRC1 585 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 GINS2Q9Y248 185 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 SOWAHDA6NJG2 315 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 CFLARO15519 480 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 KRT80Q6KB66 452 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 MCUQ8NE86 351 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 TADA3O75528 432 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 SKIP12755 728 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 USH1GQ495M9 461 aa18.02■□□□□ 0.48
SMAD3-201ENST00000327367 ABCC5O15440 1437 aa18.02■□□□□ 0.47
SMAD3-201ENST00000327367 TCP1P17987 556 aaKnown RBP18.02■□□□□ 0.47
SMAD3-201ENST00000327367 PLTPP55058 493 aa18.02■□□□□ 0.47
SMAD3-201ENST00000327367 ADALQ6DHV7 355 aa18.02■□□□□ 0.47
SMAD3-201ENST00000327367 C11orf57Q6ZUT1 292 aaPredicted RBP18.02■□□□□ 0.47
SMAD3-201ENST00000327367 DBNDD2Q9BQY9 259 aa18.02■□□□□ 0.47
SMAD3-201ENST00000327367 HAUS8Q9BT25 410 aa18.02■□□□□ 0.47
SMAD3-201ENST00000327367 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.47
SMAD3-201ENST00000327367 HAUS3Q68CZ6 603 aa18.02■□□□□ 0.47
SMAD3-201ENST00000327367 MOCS3O95396 460 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 CCDC84Q86UT8 332 aaPredicted RBP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 BAG5Q9UL15 447 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 STAT1P42224 750 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 ASPHQ12797 758 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 GRAMD1BQ3KR37 738 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 CYP4F22Q6NT55 531 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 EXOC4Q96A65 974 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 FAM135AQ9P2D6 1515 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 TADA2BQ86TJ2 420 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 ZNF594Q96JF6 807 aaPredicted RBP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 PALMDQ9NP74 551 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 PNMA6AP0CW24 399 aaPredicted RBP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 MYCLP12524 364 aaPredicted RBP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 RFC4P35249 363 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 EPHB4P54760 987 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 TMEM87BQ96K49 555 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 PHACTR3Q96KR7 559 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 SLC8A3P57103 927 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 CASP8Q14790 479 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 TMTC4Q5T4D3 741 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 RBM26Q5T8P6 1007 aaKnown RBP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 ST13P4Q8IZP2 240 aaPredicted RBP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 TRIML2Q8N7C3 387 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 BIN2Q9UBW5 565 aaPredicted RBP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 DNM3Q9UQ16 869 aa18.01■□□□□ 0.47
SMAD3-201ENST00000327367 NIP7Q9Y221 180 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMAD3-201ENST00000327367 CDK13Q14004 1512 aaKnown RBP18■□□□□ 0.47
SMAD3-201ENST00000327367 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
SMAD3-201ENST00000327367 PSDA5PKW4 1024 aaPredicted RBP18■□□□□ 0.47
SMAD3-201ENST00000327367 B4DLN1 442 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 GPAA1O43292 621 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 SYNJ2O15056 1496 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 ZYXQ15942 572 aaKnown RBP18■□□□□ 0.47
SMAD3-201ENST00000327367 TNNI3KQ59H18 835 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 CCDC125Q86Z20 511 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 HAUS4Q9H6D7 363 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 PALD1Q9ULE6 856 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 ZNF148Q9UQR1 794 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 FPGT-TNNI3KV9GXZ4 949 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 TRIP13Q15645 432 aaPredicted RBP18■□□□□ 0.47
SMAD3-201ENST00000327367 ZNF804AQ7Z570 1209 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 TTLL11Q8NHH1 800 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 NBPF3Q9H094 633 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 PHF8Q9UPP1 1060 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 ZBTB41Q5SVQ8 909 aa18■□□□□ 0.47
SMAD3-201ENST00000327367 ELAC2Q9BQ52 826 aaKnown RBP18■□□□□ 0.47
SMAD3-201ENST00000327367 FTCDO95954 541 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 NR1D1P20393 614 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 PDCLQ13371 301 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 FBXO18Q8NFZ0 1043 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 SLC39A2Q9NP94 309 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 DNAJC17Q9NVM6 304 aaKnown RBP17.99■□□□□ 0.47
SMAD3-201ENST00000327367 TNNI1P19237 187 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 ECE1P42892 770 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 SMYD4Q8IYR2 804 aaPredicted RBP17.99■□□□□ 0.47
SMAD3-201ENST00000327367 CEP19Q96LK0 163 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 ACTR5Q9H9F9 607 aaPredicted RBP17.99■□□□□ 0.47
SMAD3-201ENST00000327367 NSD2O96028 1365 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 NCF2P19878 526 aaPredicted RBP17.99■□□□□ 0.47
SMAD3-201ENST00000327367 PCDHA7Q9UN72 937 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 EVI5O60447 810 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 TECP42680 631 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 TRAF1Q13077 416 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 GABPB2Q8TAK5 448 aaPredicted RBP17.99■□□□□ 0.47
SMAD3-201ENST00000327367 NOP53Q9NZM5 478 aaKnown RBP17.99■□□□□ 0.47
SMAD3-201ENST00000327367 IRS4O14654 1257 aaPredicted RBP17.99■□□□□ 0.47
SMAD3-201ENST00000327367 SORBS3O60504 671 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 APBA1Q02410 837 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 TXLNGQ9NUQ3 528 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms