RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 C16orf86Q6ZW13 317 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 NIM1KQ8IY84 436 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 MNS1Q8NEH6 495 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 KIFC2Q96AC6 838 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 WDR24Q96S15 920 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 SLC26A6Q9BXS9 759 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 TAOK3Q9H2K8 898 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 TDRD3Q9H7E2 651 aaKnown RBP18.06■□□□□ 0.48
USH1C-202ENST00000318024 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 MRFAP1Q9Y605 127 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 BMP6P22004 513 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 RSBN1LQ6PCB5 846 aaPredicted RBP18.06■□□□□ 0.48
USH1C-202ENST00000318024 CPLX2Q6PUV4 134 aaKnown RBP18.06■□□□□ 0.48
USH1C-202ENST00000318024 CATIPQ7Z7H3 387 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 METTL16Q86W50 562 aaKnown RBP18.06■□□□□ 0.48
USH1C-202ENST00000318024 GPR161Q8N6U8 529 aaKnown RBP18.06■□□□□ 0.48
USH1C-202ENST00000318024 PRMT6Q96LA8 375 aaPredicted RBP18.06■□□□□ 0.48
USH1C-202ENST00000318024 MAP3K14Q99558 947 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 EPC1Q9H2F5 836 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 SERPINA10Q9UK55 444 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 MTMR7Q9Y216 660 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 ROBO3Q96MS0 1386 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 ECM29Q5VYK3 1845 aa18.06■□□□□ 0.48
USH1C-202ENST00000318024 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
USH1C-202ENST00000318024 NFKBIEO00221 500 aa18.05■□□□□ 0.48
USH1C-202ENST00000318024 ZSCAN12O43309 604 aa18.05■□□□□ 0.48
USH1C-202ENST00000318024 MARCKSP29966 332 aaPredicted RBP18.05■□□□□ 0.48
USH1C-202ENST00000318024 PNOCQ13519 176 aa18.05■□□□□ 0.48
USH1C-202ENST00000318024 RESP18Q5W5W9 173 aa18.05■□□□□ 0.48
USH1C-202ENST00000318024 ZNRF3Q9ULT6 936 aa18.05■□□□□ 0.48
USH1C-202ENST00000318024 CDKL5O76039 1030 aa18.04■□□□□ 0.48
USH1C-202ENST00000318024 GUCY1A2P33402 732 aa18.04■□□□□ 0.48
USH1C-202ENST00000318024 TROAPQ12815 778 aa18.04■□□□□ 0.48
USH1C-202ENST00000318024 MRIQ9BWK5 157 aa18.04■□□□□ 0.48
USH1C-202ENST00000318024 FANCLQ9NW38 375 aa18.04■□□□□ 0.48
USH1C-202ENST00000318024 STX8Q9UNK0 236 aa18.04■□□□□ 0.48
USH1C-202ENST00000318024 SERPINC1P01008 464 aa18.04■□□□□ 0.48
USH1C-202ENST00000318024 VIL1P09327 827 aaKnown RBP18.04■□□□□ 0.48
USH1C-202ENST00000318024 TOP1P11387 765 aaKnown RBP18.04■□□□□ 0.48
USH1C-202ENST00000318024 ELOA2Q8IYF1 753 aaPredicted RBP18.04■□□□□ 0.48
USH1C-202ENST00000318024 ALG1Q9BT22 464 aa18.04■□□□□ 0.48
USH1C-202ENST00000318024 NAV1Q8NEY1 1877 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 hCG_1642624A0A1W2PR95 340 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 HDLBPQ00341 1268 aaKnown RBP18.03■□□□□ 0.48
USH1C-202ENST00000318024 MDM2Q00987 491 aaPredicted RBP18.03■□□□□ 0.48
USH1C-202ENST00000318024 CXCL9Q07325 125 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 SSRP1Q08945 709 aaKnown RBP18.03■□□□□ 0.48
USH1C-202ENST00000318024 ZSCAN29Q8IWY8 852 aaPredicted RBP18.03■□□□□ 0.48
USH1C-202ENST00000318024 TC2NQ8N9U0 490 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 SMARCE1Q969G3 411 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 FUT8Q9BYC5 575 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.03■□□□□ 0.48
USH1C-202ENST00000318024 LAMB1P07942 1786 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 CDK5RAP2Q96SN8 1893 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 FAM196BA6NMK8 535 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 STX10O60499 249 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 RASSF7Q02833 373 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 PTPN21Q16825 1174 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 TEX35Q5T0J7 233 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 NEK11Q8NG66 645 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 ZNF287Q9HBT7 754 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 FAM198AQ9UFP1 575 aa18.03■□□□□ 0.48
USH1C-202ENST00000318024 GOLGA6L9A6NEM1 432 aa18.02■□□□□ 0.48
USH1C-202ENST00000318024 DDTLA6NHG4 134 aaPredicted RBP18.02■□□□□ 0.48
USH1C-202ENST00000318024 POLR3GO15318 223 aaPredicted RBP18.02■□□□□ 0.48
USH1C-202ENST00000318024 ZNF18P17022 549 aa18.02■□□□□ 0.48
USH1C-202ENST00000318024 IFNAR1P17181 557 aa18.02■□□□□ 0.48
USH1C-202ENST00000318024 OAS2P29728 719 aaKnown RBP18.02■□□□□ 0.48
USH1C-202ENST00000318024 JDP2Q8WYK2 163 aa18.02■□□□□ 0.48
USH1C-202ENST00000318024 KAT14Q9H8E8 782 aa18.02■□□□□ 0.48
USH1C-202ENST00000318024 ZCCHC17Q9NP64 241 aaKnown RBP18.02■□□□□ 0.48
USH1C-202ENST00000318024 SMC1AQ14683 1233 aaKnown RBP18.02■□□□□ 0.47
USH1C-202ENST00000318024 TXLNBQ8N3L3 684 aa18.02■□□□□ 0.47
USH1C-202ENST00000318024 CRACR2BQ8N4Y2 399 aaPredicted RBP18.02■□□□□ 0.47
USH1C-202ENST00000318024 RABGGTAQ92696 567 aa18.02■□□□□ 0.47
USH1C-202ENST00000318024 SERPINB13Q9UIV8 391 aa18.02■□□□□ 0.47
USH1C-202ENST00000318024 PCDHA5Q9Y5H7 936 aa18.02■□□□□ 0.47
USH1C-202ENST00000318024 CCDC196A0A1B0GTZ2 297 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 CLRN2A0PK11 232 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 FMNL1O95466 1100 aaPredicted RBP18.01■□□□□ 0.47
USH1C-202ENST00000318024 PPP2R3AQ06190 1150 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 GABPAQ06546 454 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 RAD51AP2Q09MP3 1159 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 LONRF3Q496Y0 759 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 KRBA2Q6ZNG9 492 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 OGFOD1Q8N543 542 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 GMLQ99445 158 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 BAG1Q99933 345 aaPredicted RBP18.01■□□□□ 0.47
USH1C-202ENST00000318024 PARD6BQ9BYG5 372 aa18.01■□□□□ 0.47
USH1C-202ENST00000318024 SHTN1A0MZ66 631 aa18■□□□□ 0.47
USH1C-202ENST00000318024 CASQ1P31415 396 aa18■□□□□ 0.47
USH1C-202ENST00000318024 TOGARAM2Q6ZUX3 1019 aa18■□□□□ 0.47
USH1C-202ENST00000318024 DGKHQ86XP1 1220 aa18■□□□□ 0.47
USH1C-202ENST00000318024 PNMA1Q8ND90 353 aa18■□□□□ 0.47
USH1C-202ENST00000318024 CLIC6Q96NY7 704 aa18■□□□□ 0.47
USH1C-202ENST00000318024 VPS33BQ9H267 617 aa18■□□□□ 0.47
USH1C-202ENST00000318024 MAP2K7O14733 419 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms