RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C19orf81C9J6K1 198 aa17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 WDR46O15213 610 aaKnown RBP17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 USH1GQ495M9 461 aa17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 CYP4F22Q6NT55 531 aa17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 PRRT2Q7Z6L0 340 aaPredicted RBP17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 MAP3K14Q99558 947 aa17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 LLPHQ9BRT6 129 aaKnown RBP17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 JMJD4Q9H9V9 463 aa17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 PRR12Q9ULL5 1215 aa17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 TLL2Q9Y6L7 1015 aa17.84■□□□□ 0.45
PDLIM5-202ENST00000318007 GNAQP50148 359 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 FSTL1Q12841 308 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 SNAPC2Q13487 334 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 SYDE2Q5VT97 1194 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 SPRYD7Q5W111 196 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 RGMBQ6NW40 437 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 RASAL3Q86YV0 1011 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 ALG1Q9BT22 464 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 VPS54Q9P1Q0 977 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 SEC63Q9UGP8 760 aaKnown RBP17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 CENPFP49454 3210 aa17.83■□□□□ 0.44
PDLIM5-202ENST00000318007 CCL15-CCL14A0A0B4J2E2 113 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 PPP2R5BQ15173 497 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 CCL15Q16663 113 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 FOXD4L6Q3SYB3 417 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 LARP1BQ659C4 914 aaKnown RBP17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 FOXD4L3Q6VB84 417 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 RRP36Q96EU6 259 aaKnown RBP17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 HMGN5P82970 282 aaKnown RBP17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 PKN1Q16512 942 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 CDC37Q16543 378 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 CPXCR1Q8N123 301 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 COA7Q96BR5 231 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 ZIC5Q96T25 663 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 RNF26Q9BY78 433 aaPredicted RBP17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 SYNPO2Q9UMS6 1093 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 KCNJ14Q9UNX9 436 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 KCNH4Q9UQ05 1017 aa17.82■□□□□ 0.44
PDLIM5-202ENST00000318007 MYH6P13533 1939 aa17.81■□□□□ 0.44
PDLIM5-202ENST00000318007 CXCL11O14625 94 aa17.81■□□□□ 0.44
PDLIM5-202ENST00000318007 DEXIO95424 95 aa17.81■□□□□ 0.44
PDLIM5-202ENST00000318007 ATG4CQ96DT6 458 aa17.81■□□□□ 0.44
PDLIM5-202ENST00000318007 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
PDLIM5-202ENST00000318007 SPZ1Q9BXG8 430 aa17.81■□□□□ 0.44
PDLIM5-202ENST00000318007 PPP1R11O60927 126 aaPredicted RBP17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 ECM2O94769 699 aaPredicted RBP17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 SYT1P21579 422 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 QRICH1Q2TAL8 776 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 SH3D19Q5HYK7 790 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 SHISA4Q96DD7 197 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 MS4A4AQ96JQ5 239 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 RIOX1Q9H6W3 641 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 H3BQV1 296 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 PRPF3O43395 683 aaKnown RBP17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 CYP2C8P10632 490 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 MOGSQ13724 837 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 IFFO2Q5TF58 517 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 WWC2Q6AWC2 1192 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 FERMT3Q86UX7 667 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 C8orf76Q96K31 380 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 C12orf42Q96LP6 360 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 LZTS2Q9BRK4 669 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 FEM1BQ9UK73 627 aa17.8■□□□□ 0.44
PDLIM5-202ENST00000318007 SCG2P13521 617 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 APLP1P51693 650 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 GTF2A2P52657 109 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 IRX3P78415 501 aaPredicted RBP17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 MCTP1Q6DN14 999 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 TYW1BQ6NUM6 668 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 CHURC1Q8WUH1 139 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 HOMER2Q9NSB8 354 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 ZBTB5O15062 677 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 ZBTB48P10074 688 aaPredicted RBP17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 PLS1Q14651 629 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 CATSPERGQ6ZRH7 1159 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 FAM43AQ8N2R8 423 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 PRPF38AQ8NAV1 312 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 PAGR1Q9BTK6 254 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 RAVER2Q9HCJ3 691 aaKnown RBP17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 AGTPBP1Q9UPW5 1226 aa17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 CTDP1Q9Y5B0 961 aaPredicted RBP17.79■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L15C9J2P7 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 BTBD19C9JJ37 291 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L13C9JLJ4 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L11C9JVI0 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L18D6R9N7 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L22D6RA61 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L17D6RBQ6 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L19D6RCP7 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L20D6RJB6 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 AOC2O75106 756 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 CETPP11597 493 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 USP17L24Q0WX57 530 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 PFKFB3Q16875 520 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 GPAT2Q6NUI2 795 aa17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 FASTKD5Q7L8L6 764 aaKnown RBP17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 PROCA1Q8NCQ7 364 aaPredicted RBP17.78■□□□□ 0.44
PDLIM5-202ENST00000318007 AGBL1Q96MI9 1066 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms