RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 ERFEQ4G0M1 354 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 GRIPAP1Q4V328 841 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 ISLR2Q6UXK2 745 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 MYRIPQ8NFW9 859 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 LRRN4Q8WUT4 740 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 RMI1Q9H9A7 625 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 PACSIN2Q9UNF0 486 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 CCDC69A6NI79 296 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 PLEKP08567 350 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 TATP17735 454 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 PPM1FP49593 454 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 SESN3P58005 492 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 COL9A2Q14055 689 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 SMAD1Q15797 465 aaKnown RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 LCA5Q86VQ0 697 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 RRP36Q96EU6 259 aaKnown RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 E7EWF7 191 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 VIMP08670 466 aaKnown RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 FXR1P51114 621 aaKnown RBP eCLIP4.05□□□□□ -1.76
GEN1-201ENST00000317402 TNNI3KQ59H18 835 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 CEP112Q8N8E3 955 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 SLC4A4Q9Y6R1 1079 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 FPGT-TNNI3KV9GXZ4 949 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 TMEM94Q12767 1356 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 AGRNO00468 2067 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 IFIT1P09914 478 aaKnown RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 RPS6KB1P23443 525 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 ZNF174Q15697 407 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 LRP10Q7Z4F1 713 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 THEMISQ8N1K5 641 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 KIF18AQ8NI77 898 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 KHSRPQ92945 711 aaKnown RBP eCLIP4.05□□□□□ -1.761e-7■■■□□ 15.6
GEN1-201ENST00000317402 TRMT112Q9UI30 125 aaKnown RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 ARHGAP23Q9P227 1491 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 HOXB7P09629 217 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 HOXA7P31268 230 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 SLC7A5Q01650 507 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 SLC35G1Q2M3R5 365 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 AMOTQ4VCS5 1084 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 AADACL2Q6P093 401 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.05□□□□□ -1.76
GEN1-201ENST00000317402 FNBP4Q8N3X1 1017 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 SSH3Q8TE77 659 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 USP6NLQ92738 828 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 SMARCC1Q92922 1105 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 FAM210AQ96ND0 272 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 CRACR2AQ9BSW2 395 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 SLC52A2Q9HAB3 445 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 TPX2Q9ULW0 747 aaKnown RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 ROS1P08922 2347 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 SSH2Q76I76 1423 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 MAP3K5Q99683 1374 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 IGSF1Q8N6C5 1336 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 GRM8O00222 908 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 SH3BP5O60239 455 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 GYS1P13807 737 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 PTPN14Q15678 1187 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 PLEKHO1Q53GL0 409 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 PRAMEF18Q5VWM3 479 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 PNKPQ96T60 521 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 ARHGAP21Q5T5U3 1957 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 WNK3Q9BYP7 1800 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 ABCA7Q8IZY2 2146 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 RALGAPA2Q2PPJ7 1873 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 HNRNPH2P55795 449 aaKnown RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 IRX1P78414 480 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 ITPK1Q13572 414 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 MAP9Q49MG5 647 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 HS1BP3Q53T59 392 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 B4GALNT4Q76KP1 1039 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 PRUNE1Q86TP1 453 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 FAM184AQ8NB25 1140 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 ZNF384Q8TF68 577 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 XAGE2Q96GT9 111 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 TMEM260Q9NX78 707 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 MEGF6O75095 1541 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 BRCA1P38398 1863 aaKnown RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 KLF18A0A0U1RQI7 1052 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 ZBTB17Q13105 803 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 ZNF365Q70YC5 407 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 POTEDQ86YR6 584 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 LCORLQ8N3X6 602 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 ZSWIM6Q9HCJ5 1215 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 DNAI1Q9UI46 699 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 MST1RQ04912 1400 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 CCDC171Q6TFL3 1326 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 EPHB6O15197 1021 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 CDKL5O76039 1030 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 SPRED3Q2MJR0 410 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 MAGEB6Q8N7X4 407 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 G3BP2Q9UN86 482 aaKnown RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 LRRC37A3O60309 1634 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 DSCAMO60469 2012 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 BUB1BO60566 1050 aaPredicted RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 PICALMQ13492 652 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 AKAP4Q5JQC9 854 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 MAEAQ7L5Y9 396 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 UHMK1Q8TAS1 419 aaKnown RBP4.04□□□□□ -1.76
GEN1-201ENST00000317402 CXorf56Q9H5V9 222 aa4.04□□□□□ -1.76
GEN1-201ENST00000317402 DACH1Q9UI36 760 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms